Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01778 ATGCCTCGTGGAACACTTGAAGTTATCTTGGTCAGTGCCAAGGGCCTTGCTCACATTGATTTTCTCTCAAAAACAGATCCTTATGTCATTCTTACATATAGAACACAGCAGCACAGAAGCAGTGTGGCAAAAGGATCTGACCCACTATGGAATGAGAGCTTTCTTTTCACAGTTTCTGATAGTGAATCAGAGCTGAATCTGAGGATAATGGACAAAGATACTTTCACtgatgatgattttgttgGTGAGGCAATAATTTTCTTAGAACCAGTGTTTGTTAATGGGAGCGTACCAGAAACTGCTTACGTTGTTGTGAAGGACGAGAAATACTCTGGGGAAATTAAGGTGGCTCTCACTTTTACTCCTGAGAGAGGTAGAGGCATCgatgaagaagaggaggagATCTCAAAGTTAAGGCCCTGGaaagaata 431 0.3828 MPRGTLEVILVSAKGLAHIDFLSKTDPYVILTYRTQQHRSSVAKGSDPLWNESFLFTVSDSESELNLRIMDKDTFTDDDFVGEAIIFLEPVFVNGSVPETAYVVVKDEKYSGEIKVALTFTPERGRGIDEEEEEISKLRPWKE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01778 143 Pfam C2 domain 4 92 IPR000008 -
Bva08g01778 143 ProSiteProfiles C2 domain profile. 1 101 IPR000008 -
Bva08g01778 143 Gene3D C2 domain 2 123 IPR035892 -
Bva08g01778 143 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 123 IPR035892 -
Bva08g01778 143 PANTHER C2 DOMAIN-CONTAINING 1 142 - -
Bva08g01778 143 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 142 - -
Bva08g01778 143 SMART C2_3c 5 100 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01778 Bva-Chr8 12048136 12049353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01778 4 95 C2H2 Transcription Factor Family AT4G21160 35.484 4.43e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01778 - - gmx:100814819 181.8