Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01769 ATGAATATGATGCGAAGGCTGAAGAGCATTGCTTCTGGGCGGACTTCCATTTCGTCAGATCCGGGAGGAGATTCAAACACAAAGAGAGCTAAGGTTGATCAAGCAACTGAAGGAAAGGGCCATGTAGCAACAAATCCTGTTGAGAGAGGTATTGTGGCTCAGGGGGATCATATGGATACATCAGAAGAAACTACTGTTGGCACATCCAATGCATCTACTGTAGCTAGGACAGAGAAATCAGGTTACGATCAACTTCCAAAAGAGTTGCATGAAATGAGAATTAAAGACGAGAAAGGAAACAACCACAAGGAAAAGGATATAGAGGCAACTATTGTGAGTGGGAATGGAACAGAAACAGGTCAGGTAATTACAACTGCCATTGGTGGTCGAGATGGGCAGCCAAAGCAGACAATCTCATACATGGCAGAACGCGTGGTTGGCACTGGTTCCTTTGGTGTTGTTTTCCAGGCTAAGTGCCTTGAAACTGGGGAAAAATTTGCCATAAAAAAGGTGTTACAAGACAAGAGATACAAGAATAGGGAACTTCAGGTCATGCGCATGCTTGACCATCCTAACGTTGTTCAGCTGAAGCATTGCTTCTTTTCAACTACTGATAAAGATGAGTTGTACCTTAACCTAGTTTTGGAGTATGTACCAGAAACCGTCTACAGAGTTTCAAAGCATTTTATCAGGATGCATCAACATATGCCTACCATCAATGTGCAACTGTATACTTACCAGATATGTCGTGCACTAAATTATATGCATCATGTGGTGGGTGTCTGTCATCGTGACATCAAACCCCAGAATCTTTTGGTTAATCCTCAGACTCATCAGCTAAAGATATGTGATTTTGGAAGTGCAAAGATGCTGGTGCCTGGTGAACCCAATATATCATACATATGCTCACGATATTATAGAGCTCCTGAACTCATATTTGGGGCAACGGAATACACAAATGCTATTGATATGTGGTCTGTTGGCTGTGTTTTGGCTGAGCTTCTTCTAGGACAGccGTTGTTTCCAGGGGAGAGTGGGGTTGATCAGTTGGTGGAAATCATTAAGATCTTGGGAACACCAACCAGAGAAGAAATCAAGTGCATGAATCCAAATTACACTGAATTTAAGTTTCCTCAGATTAAAGCACACCCATGGCACAAGGTGTTTCACAAGAGAATGCCTCCTGAGGCAGTGGATCTTGTGTCAAGGCTACTTCAGTATTCACCAAATCTACGTTGCACAGCTTTGGAAGCTTGTGCCCACCCCTTCTTTGATGACCTGAGAGATCCAAGTGCATGCTTGCCTAACGGGCGACCGCTGCCTCCTTTGTTCAATTTCACAGCTCAAGAACTGGCTGGTGCACCTGCTGAGTTGCGCCATCGACTCATTCCCGAGCACATAAGGGTTTG 1409 0.4393 MNMMRRLKSIASGRTSISSDPGGDSNTKRAKVDQATEGKGHVATNPVERGIVAQGDHMDTSEETTVGTSNASTVARTEKSGYDQLPKELHEMRIKDEKGNNHKEKDIEATIVSGNGTETGQVITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQAKCLETGEKFAIKKVLQDKRYKNRELQVMRMLDHPNVVQLKHCFFSTTDKDELYLNLVLEYVPETVYRVSKHFIRMHQHMPTINVQLYTYQICRALNYMHHVVGVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRDPSACLPNGRPLPPLFNFTAQELAGAPAELRHRLIPEHIRV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01769 469 SMART serkin_6 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01769 469 CDD STKc_GSK3 135 427 IPR039192 -
Bva08g01769 469 PANTHER SHAGGY-LIKE KINASE 6 468 - -
Bva08g01769 469 SUPERFAMILY Protein kinase-like (PK-like) 139 449 IPR011009 -
Bva08g01769 469 Gene3D Phosphorylase Kinase; domain 1 124 219 - -
Bva08g01769 469 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 468 - -
Bva08g01769 469 ProSitePatterns Protein kinases ATP-binding region signature. 146 170 IPR017441 GO:0005524
Bva08g01769 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Bva08g01769 469 Pfam Protein kinase domain 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01769 469 ProSiteProfiles Protein kinase domain profile. 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01769 469 MobiDBLite consensus disorder prediction 9 25 - -
Bva08g01769 469 MobiDBLite consensus disorder prediction 1 81 - -
Bva08g01769 469 Gene3D Transferase(Phosphotransferase) domain 1 220 468 - -
Bva08g01769 469 MobiDBLite consensus disorder prediction 58 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01769 Bva-Chr8 12016241 12021417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01769 146 433 Core Cell Cycle Gene Families AT1G76540 36.213 2.18e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bva08g01769 Pkinase 2.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01769 K00924 - gmx:100811346 834.328