Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01768 ATGAGTTTTGGGGGTTTTCTGGACAGCAACTCCGGTGGTGGCGGTGCGAGAATCGTAGCTGATATTCCTTACAGCAACGGTACTAACAACAGCAGCAGTAGCAGCAACGATAGAATGCCCTCTACTGCAATCTCACAGCCACGCCTTGTCACTTCCACTTTGGCCAAATCCATGTTCAACTCGCCCGGGCTCTCCCTTGCTCTTCAAACTAACATGGATGGGCAAggggaaatgaaaagaataccTGAAAATTATGAGTCAATTGGTGGGAGAAGGAGCAGAGAAGAAGAGCATGAAAGTAGATCTGGCAGTGATAACATGGAAGGAGCTTCTGGTGATGATCAAGATGCCGCCGACATCCCACCCAGAAAGAAACGCTATCACCGACACACACCTCAGCAAATACAAGAGCTTGAAGCTCTGTTCAAGGATTGTCCTCACCCAGATGAGAAGCAAAGACTCGAGCTTAGCAAAAGGCTTTGCTTGGAAACTAGGCAGGTGAAATTTTGGTTCCAAAATCGACGAACACAGATGAAGACCCAATTGGAACGCCACGAGAACACTTTGCTTAGGCAAGAGAACGATAAGCTCAGAGTTGAGAACATGTCTATAAGGGATGCTATGAGGAATCCCGTATGCTCAAATTGCGGTGGCCCAGCTATTATTGGCGAGATTTCACTGGAGGAGCAGCATCTAAGAATTGAGAATGCTCGATTAAAGGATGAGTTTGACCGAGTTTGTGCACTAGCTGGCAAGTTTCTGGGTCGACCCATTACATCTTTGGCTAACTCAATTGCTCCTCCATTACCAAATTCAAGTTTAGAGCTAGGAGTTGGGAGCAATGGTTTTGGTGGGATGAATACTGTGGCTACAACATTGCCTTTGGGGCCTGATTTTGGGGTGGGGATTTCTAGCCCTCTACCTGTGGTGCCTCCTGCACCTAGACCAACCGCTATGGTCACTGGCCTTGATAGATCAGTAGAGAGGTCTATGTTTCTAGAGCTTGCTTTGGCTGCCATGGACGAGTTGGTGCAGATGGCACAGGCTGGTGAGCCTCTTTGGATCCGGAACTTAGAAGGGGGAAGAGAGATATTAAACCATGAGGAGTACATGAGGACATTCACTCCTTGCATTGGCTTGAAACCCAATGGGTTTGTCACTGAGGCCTCTAGGGAGACTGGGATGGTCATCATAAACGGCTTGGCTCTTGTTGAGACTCTAATGGACTCGAATCGATGGGCAGAAATGTTTCCTTGTCTGATTGCCAGAACCTCTACTTCTGAAGTGATATCTTGCGGAATGGGAGGAACCAGGAATGGTGCACTTCAATTAATGCATGCTGAGCTCCAAGTTCTTTCTCCTTTGGTTCCGGTTCGTGAGGTCAATTTTCTACGCTTTTGCAAGCAGCACGCTGACGGGGTGTGGGCTGTGGTCGATGTGTCCGTAGACACCATCCGAGAACCATCTGGTGCACCCACTTTTGTTAACTGCAGGAGGCTCCCTTCTGGTTGTGTGGTGCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAACATGCAGAATATGATGAAAGCCAAGTCGATCAGTTGTATAGACCATCGTTAAGCTCTGGCATGGGCTTTGGCGCCCAGCGTTGGGTCACCACCCTTCAACGCCAATGCGAGTGTCTCGCCATCTTGATGTCCTCTACCGTTTCTCCTCGAGACCACACTGGCATAAACCAAAGTGGGAGACGTAGCATGCTGAAGTTGGCACAACGTATGACCAACAACTTCTGTGCCGGAGTTTGTGCTTCGACGGTGCACAAATGGAACAAGCTCAACGCCGGTAATGTAGACGAGGATGTCCGGGTTATGACCCGGAAGAGTGTCGACGACCCGGGTGAGCCACCGGGAATCGTGTTAAGCGCAGCCACCTCCGTTTGGCTCCCAGTTTCACCTCACAGATTGTTCGATTTCCTGCGAGATGAACGCCTCAGAAGTGAGTGGGACATTCTATCAAACGGTGGACCCATGCAAGAGATGGCCCACATCGCCAAGGGCCAAGACCACGGCAACTGCGTCTCCCTCCTTAGAGCCAGTGCGATGAATGCAAACCAGAGTAGCATGCTAATATTGCAGGAGACATGCACGGACGCGGGGGGCTCGCTTGTGGTGTACGCGCCGGTGGATATCCCGGCCATGCACGTCGTGATGAACGGTGGTGATTCTGCTTATGTGGCTTTGCTGCCTTCCGGGTTTGCGATTATGCCGGATGGGCCAGGGTCACGCGGGGCCCACGCAGCGGCCAACGGGAATAGCGGTGGTGGTGATAATGGAGGCAGTGGACCACATAGGGAAGGTGGGTCCCTTCTAACGGTGGCGTTTCAGATCCTTGTGAATAGTCTCCCTACGGCCAAGCTCACGGTAGAATCGGTGGAGACGGTCAACAACCTCATCTCATGCACggttcagaaaataaaagccGCGCTTCAATGTGAAAGCTG 2492 0.5016 MSFGGFLDSNSGGGGARIVADIPYSNGTNNSSSSSNDRMPSTAISQPRLVTSTLAKSMFNSPGLSLALQTNMDGQGEMKRIPENYESIGGRRSREEEHESRSGSDNMEGASGDDQDAADIPPRKKRYHRHTPQQIQELEALFKDCPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRVENMSIRDAMRNPVCSNCGGPAIIGEISLEEQHLRIENARLKDEFDRVCALAGKFLGRPITSLANSIAPPLPNSSLELGVGSNGFGGMNTVATTLPLGPDFGVGISSPLPVVPPAPRPTAMVTGLDRSVERSMFLELALAAMDELVQMAQAGEPLWIRNLEGGREILNHEEYMRTFTPCIGLKPNGFVTEASRETGMVIINGLALVETLMDSNRWAEMFPCLIARTSTSEVISCGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHADGVWAVVDVSVDTIREPSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVDQLYRPSLSSGMGFGAQRWVTTLQRQCECLAILMSSTVSPRDHTGINQSGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNANQSSMLILQETCTDAGGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIMPDGPGSRGAHAAANGNSGGGDNGGSGPHREGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01768 830 MobiDBLite consensus disorder prediction 23 46 - -
Bva08g01768 830 MobiDBLite consensus disorder prediction 757 781 - -
Bva08g01768 830 CDD homeodomain 123 181 IPR001356 GO:0003677
Bva08g01768 830 SMART HOX_1 122 185 IPR001356 GO:0003677
Bva08g01768 830 ProSitePatterns 'Homeobox' domain signature. 156 179 IPR017970 GO:0000981|GO:0006355
Bva08g01768 830 CDD START_ArGLABRA2_like 329 557 - -
Bva08g01768 830 SMART START_1 334 558 IPR002913 GO:0008289
Bva08g01768 830 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 67 827 - -
Bva08g01768 830 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 67 827 IPR042160 -
Bva08g01768 830 Coils Coil 175 202 - -
Bva08g01768 830 MobiDBLite consensus disorder prediction 1 46 - -
Bva08g01768 830 Gene3D - 406 554 IPR023393 -
Bva08g01768 830 SUPERFAMILY Bet v1-like 327 558 - -
Bva08g01768 830 SUPERFAMILY Bet v1-like 586 823 - -
Bva08g01768 830 Gene3D - 110 197 - -
Bva08g01768 830 SUPERFAMILY Homeodomain-like 108 181 IPR009057 -
Bva08g01768 830 Pfam Homeodomain 124 179 IPR001356 GO:0003677
Bva08g01768 830 ProSiteProfiles START domain profile. 325 561 IPR002913 GO:0008289
Bva08g01768 830 MobiDBLite consensus disorder prediction 73 131 - -
Bva08g01768 830 MobiDBLite consensus disorder prediction 84 104 - -
Bva08g01768 830 Pfam START domain 334 558 IPR002913 GO:0008289
Bva08g01768 830 ProSiteProfiles 'Homeobox' domain profile. 121 181 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01768 Bva-Chr8 12005057 12011039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01768 1 830 Homeobox Transcription Factor Family AT3G61150 65.914 0.0 1056
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva08g01768 START 3e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01768 K09338 - tcc:18614208 1388.63