Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01760 ATGGGGTCTCACCAAGAATCTGCTAGGCTCTTAGAGGCTGGCAACGTCAAAGGGTTAAGCAGGGAGATCAAGCATGGCCGAACGGCACATAACATGTCCTCCTCTTCCTTGCGGAAGAAATCTGATTTCGTGCTTCTATCGAAGGTTCGTTGCGCGCTCATTAGGAATGTGTTGGCAAATATTCAAGAGGTGATTCTGGGCACCAAACTGTCCATTCTGTTTCCTGCAATTCCTCTCGCCATCGTTGCTGATTGCTATGGCTTTGGAAGGCCATGGGTTTTTGCTTTGAGCTTGCTGGCACTTACACCCCTTGCTGAACGTGTTAGCTTCTTGACTGAACAGTTGGCCTTTTACACTGGTCCCACAGTTGGAGGGCTTCTGAATGCAACATGTGGCAATGTTACAGAGCTCATAATAGCAATATTTGCTCTGAGCCAGAATAAAATAGCTGTGGTGAAGTACTCTCTCTTGGGTTCCATACTTTCCAACCTTCTTCTAGTTCTTGGAACCTCCCTCTTTTGTGGTGGCATTGCAAACCTCAGAAAGGAGCAGAAATATGATAGAAGGCAAGCAGATGTCAACTCACTTATGCTACTACTGGCATTGTTGTGCCACTTGCTGCCAATGCTCTTCAGATATGCTAGCGGCTCAGCTTCTTTTCCCAATGACCCAACTCTCCCATTGTCAAGAGCTGGTAGCATTGTGATGCTAATTGCTTACTTTGCTTACCTTGTCTTTCAACTGTGGACTCACCGCCAATTGTTTGAAGCCGAGGATGAAGACAACGATGGTGACAGTGTGGCAGAAGAAACACCAGTGATAGGATTCTGGAGTGGGTTTGCATGGCTTGTGGGGATGACTGTACTCATAGCTTTGTTGTCTGAGTATGTGGTGCAGACAATTGAGGATGCATCGGATTCATGGGGTCTGTCTGTCAGTTTCCTCAGCATAATCCTTCTACCTATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCTTTCAAGAACAAGCTGGACATCTCGTTGGGCGTTGCTTTGGGTTCAGCTACTCAAATTTCCATGTTTGTGGTTCCCCTATGTGTGGTTGTTGCTTGGGTAATGGGTATCAAAATGGACCTCAACTTCAATCTCATTGAAACAAGTTCTCTTGCTTTAGCAATAATAGCCACAGCCTTCACTTTACAGGACGGAACTTCTCACTACATGAAAGGTCTTATTCTGCTGCTCTGCTACATTGCGATTGGGGCATGTTTCTTTGTCCAGAGAACACCATTTAACCATGTTAATGGCTCAAACATGACAATTAAAACAACAATTGATCCAATATCTACAGCTTA 1346 0.451 MGSHQESARLLEAGNVKGLSREIKHGRTAHNMSSSSLRKKSDFVLLSKVRCALIRNVLANIQEVILGTKLSILFPAIPLAIVADCYGFGRPWVFALSLLALTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNVTELIIAIFALSQNKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANLRKEQKYDRRQADVNSLMLLLALLCHLLPMLFRYASGSASFPNDPTLPLSRAGSIVMLIAYFAYLVFQLWTHRQLFEAEDEDNDGDSVAEETPVIGFWSGFAWLVGMTVLIALLSEYVVQTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFVVPLCVVVAWVMGIKMDLNFNLIETSSLALAIIATAFTLQDGTSHYMKGLILLLCYIAIGACFFVQRTPFNHVNGSNMTIKTTIDPISTA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01760 448 Pfam Sodium/calcium exchanger protein 279 416 IPR004837 GO:0016021|GO:0055085
Bva08g01760 448 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016021|GO:0055085
Bva08g01760 448 TIGRFAM caca2: calcium/proton exchanger 56 422 - -
Bva08g01760 448 TIGRFAM cax: calcium/proton exchanger 75 422 IPR004798 GO:0006816|GO:0015369
Bva08g01760 448 Gene3D - 266 422 IPR044880 -
Bva08g01760 448 Gene3D - 121 257 IPR044880 -
Bva08g01760 448 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 4 435 - -
Bva08g01760 448 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 435 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01760 Bva-Chr8 11957980 11961681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01760 6 427 Antiporters AT2G38170 71.163 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01760 K07300 - rcu:8267509 669.077