Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva08g01714 | atgggttCCGGTATGGAGTTCTTTCGTCGAACTCTTTTCCTAGTAGTAATCTGCGCTCTTGCTGCCGCATCAAACGCTCAGTATGAGGTTTCGACAGATAGGAAGTTCAAGTGCAGCACAGAGGGAGCAACGTGTCTCGCCCTGGTCGATTACAGGCCTGCCAGCGGCACTTACGGTGGCATTCAAACCCTCTTCAACATTAGAGAGCTTAGGGACATTCAGGGTGTGAACTTACAGCTCAAAGATACCATCTCACCAAACGATCAGGTGATCCCACTGGGCGTAATTCGAATCCCTTTCACTCGCAAATGCCAAGATGCGTTAGGTACGTCCATTAACGGCCCCTTCTATAAGATCCAATCGGACGAAACATTGGAACATATAGGGAAAGTGGTGTTTTCCAATATAGTCAAGTGGCCGCAAATCCAAAAGGCTAATAATATTTCTGACCCATTCAACATATCTATGGGGCAGGAGCTGCGGATTCCACTGCCTTGTAGCTGCGATCAGGTGGAGGGAACCATGCTGGTCCATTACGGACGCGTGTTCCAAAATATCTCAACTAGCTATCTTGAAGAGATGGCACAGACGGCCGGCATCGCAGTGGAAACCATGAAGGATCTGAACGGAATTCTTGATGAAAGCCAAATTCAGGCCGGTGAGATTTACGATGTGCCGCTTAAAGGTTTGTTCTGTTCTTCTTCCTA | 707 | 0.4752 | MGSGMEFFRRTLFLVVICALAAASNAQYEVSTDRKFKCSTEGATCLALVDYRPASGTYGGIQTLFNIRELRDIQGVNLQLKDTISPNDQVIPLGVIRIPFTRKCQDALGTSINGPFYKIQSDETLEHIGKVVFSNIVKWPQIQKANNISDPFNISMGQELRIPLPCSCDQVEGTMLVHYGRVFQNISTSYLEEMAQTAGIAVETMKDLNGILDESQIQAGEIYDVPLKGLFCSSS | 235 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva08g01714 | 235 | SMART | LysM_2 | 189 | 226 | IPR018392 | - | |
Bva08g01714 | 235 | SMART | LysM_2 | 116 | 163 | IPR018392 | - | |
Bva08g01714 | 235 | CDD | LysM | 116 | 162 | IPR018392 | - | |
Bva08g01714 | 235 | PANTHER | LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 | 17 | 234 | - | - | |
Bva08g01714 | 235 | Gene3D | LysM domain | 114 | 173 | IPR036779 | - | |
Bva08g01714 | 235 | PANTHER | LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 | 17 | 234 | - | - | |
Bva08g01714 | 235 | ProSiteProfiles | LysM domain profile. | 115 | 162 | IPR018392 | - | |
Bva08g01714 | 235 | Pfam | LysM domain | 117 | 163 | IPR018392 | - | |
Bva08g01714 | 235 | SUPERFAMILY | LysM domain | 116 | 164 | IPR036779 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva08g01714 | Bva-Chr8 | 11058075 | 11058782 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva08g01714 | 35 | 235 | LysM Receptor-like Protein (LYPs) Gene Family | AT2G17120 | 38.614 | 3.29e-36 | 129 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva08g01714 | - | - | jcu:105630073 | 161.384 |