Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01698 ATGCGAATAGCTTCAAGTCTAGCTACTGGAGCAaagTCCCTTCTAGAGAATGGCTTATCTCCTTTGGAGCTCGAGAAGTTACCCAAAGTCACCGGCAAAGAACTTGTTGCTGGCATTGAATGCGCAGTTTGCCTTGATGAGATCGAGAACGAGCAAATGGCTAGAGTGGTTCCTGGTTGCAAGCACGTGTTCCATGTGGAATGCGCAGATACTTGGCTTTCCTTGCATCCACGATGTCAGGTTTGTAGAGCTAAAGTGGATCCTCAGCTTCTCAACTCGTCTGAAAACCCATA 293 0.471 MRIASSLATGAKSLLENGLSPLELEKLPKVTGKELVAGIECAVCLDEIENEQMARVVPGCKHVFHVECADTWLSLHPRCQVCRAKVDPQLLNSSENP 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01698 97 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 89 IPR013083 -
Bva08g01698 97 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 8 96 - -
Bva08g01698 97 SUPERFAMILY RING/U-box 35 89 - -
Bva08g01698 97 SMART ring_2 41 82 IPR001841 -
Bva08g01698 97 Pfam Ring finger domain 40 83 IPR001841 -
Bva08g01698 97 ProSiteProfiles Zinc finger RING-type profile. 41 83 IPR001841 -
Bva08g01698 97 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 8 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01698 Bva-Chr8 9586501 9589031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01698 7 96 C3H Transcription Factor Family AT5G42200 53.763 2.58e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01698 K19037 - zju:107422320 132.109