Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01663 atgtcattttcttctcttaatgTTCCTCGAAGAAAATATGATGTCTTTCTTAGCTTCCGGGGCATCGACACTCGTCATCCATCAACTGTACGCCATCAAAAAGGGTGTTATGAGGATGCATTTAGAAGACAAGAGGAAAAGTTTAAGCATGACTCATTCAAAACGCAAAGCTGGAGAGCTTCATTGAAGAAGACAGCAAATCTATCTGGATTTGATTCCTCAAAGTTTGAGAATGATGCTGACCTTGTTGAGCAGATTGTCAACTGTGTTtgggaaaaattgaaagaaattatgcCCCCAAATGATTCAACAGAGCTTATTGGAATTCATGAACAAATTACAGAATTGGAATTATTATCGTGCCTAAGGTTGCATGATGTTCATATCATAGGGATTTGGGGCATGGGCGGTGTTGGTAAGACCACTATTGCTAGTCTTTTGTTTGAGaaattatctcataaataCGATGGCTatgaatttttggaaaatgtaAAGGAAGAATTGGGGAAATGCGGAATGACTCATTTGAAGAATAAGCTTATTTCTAAATTGTTAGGAGGAGAAGAGTTAGGTATTACTATCCCTGTTGGTTTTCTTTACCCAGTAATTGGGCTGAGAAATCTCGAAGATAAAGCTCTTATATCTATAGTTAATAAAAGGGTGATCATGCATAATTTGATTCAAGAAATGGGTCAACAAATTGTTCGTGAGGAATCTCCTAATGATCTTGGTAAACACAGACACTTGTGGAATCATGATGATATTTATGAAGTATTGGAGAACAACAGGGGGACTGCAGATAtagaaagtataaatttacTACGTGGAAGTGACAGAGGGATTCACTTAAGTCCCAAAGTCTTCGAAGGGATGgttaatctaaaatatttgagtttCAACAACTCCTCTAGATTGCACATTTCTGGCAATAAACTTGATTCACTAccaaagaaactaaaatacttCTCCTGGGATTTCTATCCTTCGAAATCCCTTCCATCCAAATTATGTTTGAAGAATCTTGTTCAACTTCACCTGCGCAATAGTAATGTCAGAAGACTTTGGAATGGAACTCAGGATCTtgggaatttaaaaaaaataaacctttATGGTTGTGAATTCCTGAAAGAGCTCCCAGATATGTCGAAGGCCTCAAAACTTGAACAGGAGTTCTCAGTGTTGTCAGAGCGGACATGCATAGAAAATGTCCCCTCACCAGTCACTCTTGGCCTCATGAATTCATTAACAATTTTGTCGTTAATTGGTATGAAATTAGTAAGCCTGCCTGCAAGCATCAAGCATCTTTCAAATCTGGAACAACTTTATTTGTGCCATTGCTCTTGCCTTCAGTCTATACCCGAGCTTCCACCGTCCATTAAATGCTTAGATGCCAGGGGATGCAGTTCCCTGAAGGCACTATTCACTTCAACTTCTTCGTGGCCTGGTTCTCATCTCATTAATCCGCCGTATCCTTTCGTGGTTATTCTCAAGGGTTGTTATGAATTGGGTGAAGATACAATGATTGATATCGTTATATACTTTATGCTCTTGACAATAGGAGCTGTTTATCACCAACCAACACCAGGTGAGCCTTTACCAAGTGAGCCTTTACCAGGTGGAACCTTACCATACTACCCTCTCTCTCTGGCGTGTATCCCACTAAATAAACTTCCAGATGTTTTCAATTTCCAGACCCGTAAAGGTGGATACATTAGTATTCAAGTGCCTCTGAATTCTGACTTGATGGCCATTGTTTTCTGCTTCGCTGGATGCATTCTAGAATACCGACACTTCTCTCTCAGTTGCTTCGTGCATGTAAGCAATGGTGAAACAATGAAGTACTTTAAATACATCGATCTTTGGGGGAATCCTGGAGATCATGTGGTGTTATGGTATAATGATCATTTTAATAGCCGTATAATGAATGGAATTAAAGAAAGCAGAGCCTTATCCTCACCCACTGATGAATACACAAAGGtttcatttcaactagatGAAGTCTATACTCGTGGaacaaataaggaaaaagTGGTTGGGGTGTACCCAATATATGCCTCAGAATTACAGAGCTGCAGTACCAATATCAAGAGATCTTGGGCACAACTTCTCACTCATAGCTg 2120 0.3679 MSFSSLNVPRRKYDVFLSFRGIDTRHPSTVRHQKGCYEDAFRRQEEKFKHDSFKTQSWRASLKKTANLSGFDSSKFENDADLVEQIVNCVWEKLKEIMPPNDSTELIGIHEQITELELLSCLRLHDVHIIGIWGMGGVGKTTIASLLFEKLSHKYDGYEFLENVKEELGKCGMTHLKNKLISKLLGGEELGITIPVGFLYPVIGLRNLEDKALISIVNKRVIMHNLIQEMGQQIVREESPNDLGKHRHLWNHDDIYEVLENNRGTADIESINLLRGSDRGIHLSPKVFEGMVNLKYLSFNNSSRLHISGNKLDSLPKKLKYFSWDFYPSKSLPSKLCLKNLVQLHLRNSNVRRLWNGTQDLGNLKKINLYGCEFLKELPDMSKASKLEQEFSVLSERTCIENVPSPVTLGLMNSLTILSLIGMKLVSLPASIKHLSNLEQLYLCHCSCLQSIPELPPSIKCLDARGCSSLKALFTSTSSWPGSHLINPPYPFVVILKGCYELGEDTMIDIVIYFMLLTIGAVYHQPTPGEPLPSEPLPGGTLPYYPLSLACIPLNKLPDVFNFQTRKGGYISIQVPLNSDLMAIVFCFAGCILEYRHFSLSCFVHVSNGETMKYFKYIDLWGNPGDHVVLWYNDHFNSRIMNGIKESRALSSPTDEYTKVSFQLDEVYTRGTNKEKVVGVYPIYASELQSCSTNIKRSWAQLLTHS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01663 706 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 27 189 - -
Bva08g01663 706 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 202 461 - -
Bva08g01663 706 Pfam NB-ARC domain 126 263 IPR002182 GO:0043531
Bva08g01663 706 Gene3D Ribonuclease Inhibitor 395 504 IPR032675 -
Bva08g01663 706 Gene3D Ribonuclease Inhibitor 238 394 IPR032675 -
Bva08g01663 706 PRINTS Disease resistance protein signature 359 375 - -
Bva08g01663 706 PRINTS Disease resistance protein signature 129 144 - -
Bva08g01663 706 Gene3D - 26 93 IPR035897 -
Bva08g01663 706 SUPERFAMILY L domain-like 236 624 - -
Bva08g01663 706 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 189 IPR044974 GO:0006952
Bva08g01663 706 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 202 461 IPR044974 GO:0006952
Bva08g01663 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 189 IPR027417 -
Bva08g01663 706 Pfam TIR domain 27 108 IPR000157 GO:0007165
Bva08g01663 706 Gene3D - 94 237 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01663 Bva-Chr8 9017117 9024668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01663 203 460 WRKY Transcription Factor Family AT4G12020 33.824 1.33e-28 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01663 - - aprc:113850948 216.468