Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01657 ATGAGTGCATTTTTCTCTCTGAATTTTCTTCTGCTAATTCTTGCTTCTTTAGCCAAAGAAGCTATCTGTGTATCAAAGGAGATTCCGGCTCAGCAAGCAGCTGATCGGGTGGTTGGACTTCCAGGGCAGCCTCCGGTGAAGTTCAAGCAATATGCAGGTTATATCACAGTCAATGGAACTCATGGCAGAGCATTGTTCTACTGGTTCTTCGAGTCCCAAGAGAATCCACATGAAAAGCCTCTTCTTCTCTGGCTCAATGGAGGCCCTGGATGTTCCTCAATTGGCTATGGAGAAGCAGAAGAGCTAGGACCCTTTTTTCCCCAAAACAGCACTGAACCAAAACTAAAGTTGAACCCTTATGCTTGGAACAAAGCTGCAAATTTGCTCTTTCTTGAGTCCCCAGTTGGAGTGGGATTTTCCTATACCAACACCACCAATGATATCAGTGAACTTGGTGACACAATCACTGCTAAGGATTCACATACCTTCATTGTAAAATGGTTTCAGCGTTTTCCACAGTTCAGGTCCCATGAGTTCTACATTGCTGGTGAAAGCTATGCAGGTCACTATGTTCCCCAACTTTCAGAGCTTATTTTAGACAATAATCACAACCCTGCCAAGAAAGACTACATTAACTTCAAAGGGCTCatgATCGGGAATGCATTAATGGATGATGAAACAGATCAAAAGGGAATGATAGATTATGCTTGGGATCATGCTGTGATTTCTGATGGGTTATATGAAAACATCAAGAAGAAATGCAACTTCAGCATGCCAAAACCAACACATGAATGCAATATTGAACTCAACAAGTACTTTGATGTGTACAAGATTATTGACATGTATAGCTTGTATGCTCCCACGTGCCCCAGCGATAACAACAGCACCAGAAGGAAACGCCCTGTTATCAATGGCATAGCTCCCCATTCATTCTCCAAATTTGATGGATGGCATCAAAGGCCTGCAACTGGATATGATCCTTGTGCATCTGATTATACTGAACTGTACTTGAATAGGCCACAAGTCCAAAAGGCATTGCATGCCAACATTACCAAAATTCCATATCCATGGACTCATTGCAATAATAATATCACATTTTGGAAGGATGCACCCTCATCAATGCTTCCTGTCATCAAGAAGCTTATAGCCGGGGGTCTTCGCGTTTGGGTTTACAGtggAGATACCGATGGAAGAATTCCTGTAACTGCTACAAGATACACGCTCAGAAAACTTGGACTCAATATTGTTAATGATTGGACCCCGTGGTATACCAGCAAGGAGgTAGGAGGGTGGACTATTGAACATAAAGGACTCACATTTGTGACCATTAGAGGAGCCGGCCATCAGGTTCCTACTTTTGCTCCCAAGCAAGCTCTTCAGCTAGTTCGACACTTCTTgctcaataaaaaattgccACGTGGACCAATTTA 1430 0.4217 MSAFFSLNFLLLILASLAKEAICVSKEIPAQQAADRVVGLPGQPPVKFKQYAGYITVNGTHGRALFYWFFESQENPHEKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSTEPKLKLNPYAWNKAANLLFLESPVGVGFSYTNTTNDISELGDTITAKDSHTFIVKWFQRFPQFRSHEFYIAGESYAGHYVPQLSELILDNNHNPAKKDYINFKGLMIGNALMDDETDQKGMIDYAWDHAVISDGLYENIKKKCNFSMPKPTHECNIELNKYFDVYKIIDMYSLYAPTCPSDNNSTRRKRPVINGIAPHSFSKFDGWHQRPATGYDPCASDYTELYLNRPQVQKALHANITKIPYPWTHCNNNITFWKDAPSSMLPVIKKLIAGGLRVWVYSGDTDGRIPVTATRYTLRKLGLNIVNDWTPWYTSKEVGGWTIEHKGLTFVTIRGAGHQVPTFAPKQALQLVRHFLLNKKLPRGPI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01657 476 SUPERFAMILY alpha/beta-Hydrolases 32 471 IPR029058 -
Bva08g01657 476 Gene3D alpha/beta hydrolase 32 291 IPR029058 -
Bva08g01657 476 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Bva08g01657 476 Gene3D - 328 365 - -
Bva08g01657 476 Pfam Serine carboxypeptidase 41 467 IPR001563 GO:0004185|GO:0006508
Bva08g01657 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Bva08g01657 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Bva08g01657 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Bva08g01657 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Bva08g01657 476 ProSitePatterns Serine carboxypeptidases, histidine active site. 438 455 IPR033124 GO:0004185
Bva08g01657 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 475 IPR001563 GO:0004185|GO:0006508
Bva08g01657 476 Gene3D - 374 467 - -
Bva08g01657 476 PANTHER CARBOXYPEPTIDASE 15 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01657 Bva-Chr8 8944346 8952696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01657 323 471 Calmodulin-binding Proteins AT2G22960 30.000 7.85e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01657 K16297 - gmx:100781503 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01657 08 8944346 8952696 Bva08g01657 08 8944346 8952696 ECH