Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01640 ATGAGCATTCGATCCATGGCAATCTACATGAAAATGTCTGGCAACAATTTGAATGGTTCCCTTCCAGTAGAAGTGGGAACTCTGCAAAATCTTGGAGTGTTGGATTTGCCCAGAAACATGTTGTCTGGAGAAATTCCCATGACTCTCGGAAGTTGCGTAAGCTTAGAAGAATTACAAATGCAAGATAACTTCTTTGTGGGGAAAATTCCTCCTTCACTAATTTCATTGAGAGGCGTGGAAGTTCTagatttttctcaaaacaaTTTATCAGGTAATGTTCCTCAATTTTTGGAAGACTTTCACTTACTTAGGATATTGAATCtatctttcaataattttgagGGAATGGTACCAGAAAAAGGTTTTTTTAAGAACTCAAGTGCAGTTTCGGTCATAGGAAACAACATCAAGCTATGCAGTAGCATTCCTGAACTACAATTGTCCAAGTGCAAACTCAAAACAGCAAGATTGACCCTCACGGCTAAGCTCATGATTGCAGCCTCCGTAATTAGTGTGGCTTTGGCTATGtctattttgtttctcttggTTGCAAAGAAGAATAGAGTAAAACCCACTTCAATCTCTTCACTGAACTCGCCGTTCCAAGCGTCTTACGGAAGCCTTCTCAAAGCCACTGATGGATTCAGCTCAAGTAATTTAATTGGAGTGGACAGTTTTGGGTCTGTTTATAGAGTCATTCTTGAAAAGGATGGAAATGTTGTTGCTGTGAAGGTGTTGAACCTTGTAAACCCAAGAGCTTCCAAGAGTTTTAAAGCTGAGTGCGAGGCCTTAAGTAACATAAGACATAGAAATCTGGTTAAGCTACTAGTTGTGTGCTCTAGTGTTGATTATCAAGGAAATGATTTTAAGGCATTGGTTTATGAGTTCATGGTCAAGGGCACCCTAAAGGAGTGGTTGCATCCAATCATTAGTACTAACAATAAGACACAAATGAGTTTAAACTTGCTTCAGAGACTTAACATTGCTATTGATGTAGCGAATGCGATGTA 1010 0.3762 MSIRSMAIYMKMSGNNLNGSLPVEVGTLQNLGVLDLPRNMLSGEIPMTLGSCVSLEELQMQDNFFVGKIPPSLISLRGVEVLDFSQNNLSGNVPQFLEDFHLLRILNLSFNNFEGMVPEKGFFKNSSAVSVIGNNIKLCSSIPELQLSKCKLKTARLTLTAKLMIAASVISVALAMSILFLLVAKKNRVKPTSISSLNSPFQASYGSLLKATDGFSSSNLIGVDSFGSVYRVILEKDGNVVAVKVLNLVNPRASKSFKAECEALSNIRHRNLVKLLVVCSSVDYQGNDFKALVYEFMVKGTLKEWLHPIISTNNKTQMSLNLLQRLNIAIDVANAM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01640 336 Gene3D Ribonuclease Inhibitor 4 158 IPR032675 -
Bva08g01640 336 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 336 - -
Bva08g01640 336 SUPERFAMILY Protein kinase-like (PK-like) 195 336 IPR011009 -
Bva08g01640 336 ProSiteProfiles Protein kinase domain profile. 215 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01640 336 Pfam Protein tyrosine and serine/threonine kinase 219 336 IPR001245 GO:0004672|GO:0006468
Bva08g01640 336 Gene3D Transferase(Phosphotransferase) domain 1 200 336 - -
Bva08g01640 336 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 336 - -
Bva08g01640 336 SUPERFAMILY L domain-like 9 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01640 Bva-Chr8 8791557 8792567 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01640 1 336 Receptor kinase-like Gene Family AT3G47570 46.307 3.52e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva08g01640 PK_Tyr_Ser-Thr 8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01640 - - peu:105130519 397.127