Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01635 ATGAGCATTCCATCCATAGCAATCTACATGGGCATGTCTGGCAACAATTTAAACGGTTCCCTTCCAGTAGAAGTGGGAACTCTGCAAAATCTTGGAGTGTTGGATTTGTCTAGTAACATGTTGTCTGGAGAAATTCCCACGACTCTCGGAAGTTGCTTAAGCTTAGAAGAGTTACGAATGCAAGATAACTTCTTCGTGGGGAAAATTCCTTCTTCACTAAGTTTATTGAGAGGCATGGAAGTTCTAGATTTTTCTCACAACAATTTATCAGGTAACATTCCTCAATTTTTGGAAGACTTTCACTTACTTAGGATATTGAATCTATCTTTCAATAGTTTTGAGGGAATGGTACCAGAAAAAGGTGTTTTTAAGAACTCAAGTGCAGTTTCGGTCATAGGAAACAGCAAGCTATGTAGTAGCATTCCTGAACTACGATTGTGCAAGTGCAAACTCAGAACAGCAAGATTGACCCTCACCGCTAAGCTCATTATTGCAGCCTCCGTAATTGTATGTGTGGCTTTGGCTATGtctattttgtttctcttgtGTGCAAAGAAGAATAGACTGAAACCCACTTCAGGCTCTTCACTGAACTCGCTGTTCCAAGTGTCGTACGGCAGCCTTCTCAAAGCCACTGATGGATTCAGCTCAAGTGTTAACCTTGTAAACCCAAGAGCTTCCAGGAGTTTCAAAGCTGAGTGCGAGGCCTTAAGGAACATAAGACATAGAAATCTGGTTAAGCTACTAGTTGTGTGCTCTAGTGTTGATTATCAAGGAAATGATTTTAAGGCATTAGTTTATGAGTTCATGGTCAAGGGCACCCTGGAGGAGTGGTTGCATCCAATCATCAGTACTGAAAATCAGACACAGATGAGTTTAAACTTGCTTCAAAGACTTAACATTGTTATTGATGTAGCCAATACAATAGAGTATCTTCATCATGGTTGTGAAACACCAATAGTTCACTGTGATTTAAAGCCAAGCAATGTGCTTCTAGACGAAAATATGGTGGGACATGTTGGGGACTTCGGATTGGCAAGATTCTTTCAAGAAGGCACTCAGAACTATTCTGCTCCTCAATCAAGCACAATTGAAGTGAGAGGGACTATTGGTTACACTGCACCAGGATTAGCTTGCTCGAATGAAATCCCAAATGAACGGATGAACATGAAGGATGCAACAGCTCAGCTCATCACTGTCAAGGAAAAGCTTCTGGCAGAGATAAGGTGCAGCTATCTCAATATTCAACCGGTGGCAAGTTCTGTGTTGTCTCATCGCTG 1280 0.4094 MSIPSIAIYMGMSGNNLNGSLPVEVGTLQNLGVLDLSSNMLSGEIPTTLGSCLSLEELRMQDNFFVGKIPSSLSLLRGMEVLDFSHNNLSGNIPQFLEDFHLLRILNLSFNSFEGMVPEKGVFKNSSAVSVIGNSKLCSSIPELRLCKCKLRTARLTLTAKLIIAASVIVCVALAMSILFLLCAKKNRLKPTSGSSLNSLFQVSYGSLLKATDGFSSSVNLVNPRASRSFKAECEALRNIRHRNLVKLLVVCSSVDYQGNDFKALVYEFMVKGTLEEWLHPIISTENQTQMSLNLLQRLNIVIDVANTIEYLHHGCETPIVHCDLKPSNVLLDENMVGHVGDFGLARFFQEGTQNYSAPQSSTIEVRGTIGYTAPGLACSNEIPNERMNMKDATAQLITVKEKLLAEIRCSYLNIQPVASSVLSHR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01635 426 SMART serkin_6 158 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01635 426 ProSiteProfiles Protein kinase domain profile. 194 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01635 426 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 221 - -
Bva08g01635 426 SUPERFAMILY Protein kinase-like (PK-like) 218 380 IPR011009 -
Bva08g01635 426 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 219 375 - -
Bva08g01635 426 Gene3D Transferase(Phosphotransferase) domain 1 202 390 - -
Bva08g01635 426 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 221 - -
Bva08g01635 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Bva08g01635 426 Gene3D Ribonuclease Inhibitor 5 154 IPR032675 -
Bva08g01635 426 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 219 375 - -
Bva08g01635 426 SUPERFAMILY L domain-like 8 139 - -
Bva08g01635 426 Pfam Protein kinase domain 228 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01635 Bva-Chr8 8765538 8767222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01635 15 96 Receptor kinase-like Gene Family AT3G47570 37.349 1.93e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva08g01635 Pkinase 9.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01635 - - palz:118060357 477.633