Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01634 ATGGGCAACCATATTTTCTCTCAGAAATTCAAGTTTACCTTGTGTGCAGCCATTGAGATTCTCTTGCTTTGCAGTGTTCTTGGAGGAAGCAATGAAACTGACCAACTAGCTTTACTTGATATCAAGTCAAAGATAACTGATCACCCTCTTGGCATCATGAGCTCATGGAATTCATCGTTTCATTTTTGCCAATGGCGTGGCATCACATGTGGGAAACGCCACCAGAGAGTCACCATGCTCGATCTGAGCTCACATAGCCTGCAGGGTTCAATATCTGCACACTTGGGCAACCTCACCTTCTTACAATTTCTGCACCTGTACAACAATAGCTTCATTGGAGAAATTCCTCCTCAGATTGGCAACCTCCACAGGCTAAAAGTACTTGATCTGTATCAAAACTCACTGACAGGAAAAATTCCTGCAAACATATCCGGCTGCTCAAATCTACTCGTTGTCAGTATTGGTTCCAACAGGTTAGTTGGACAGGTTCCATTGGAGTTTAGTACATTGACAAAGCTGCTTATCATTAATATTCAACTCAATAATTTAACTGGTGAGATTCCTCCGTTTTTCGGGAATTTCTCAGATTTGGAGGTACTCTCAATTACCTACAACAATTTCAAAGGAACTATTCCGGACAGCGTTGGACAGCTCAAGAAACTATGGTTTTTGGCAATGGGTGTAAACATGTTGTCAGGTACTGTACCTCCTTCGATATACAACGTGTCTTCGATGAATAGTTTTACTGTAGAAGAGAACAAGCTTCATGGGACAATACTCTCTGACTTGGGCAATGCTTTCCCTAGCATTACTAACTTCAATATTGGATACAACCAGTTTACTGGAACTATTCCGGCTTCCTTGTCCAATGCTTCCAACTTGGAAATATTTACCATTGCCAATAACGGGATTGGTGGAAAGCTGCCTTCTTTGGAGAAGCTGCAAAAGCTTCGGTGGCTGAGTATTTCCATCAACAATCTTGGAACAGGAAGTGATGGTGATTTGGACTTCTTGAACACTGTGAGCAACAAGACTAGTTTGAAGCTTTTAGCCATAAATTCCAACAATTTTGGTGGGTCTTTTCCCATTTCCATCACCAATTTTACCAGTCTTTCAATCCTGACCATGGATAGGAATAAGTTATATGGAAATATCCCTGCTGGGATAGGGAATTTGGTCAATTTGGAGATGATGTATACTGATGGCAACAAATTTACTGGCCATATTCCAGAAGAAATTGGAAAACTTAAACAGCTAAAGAAGCTGGATTTTGAAGGAAACAAATTAACAGGTAATATTCCATCATCTTTAGGAAATTTAACGCAGCTGACCCATCTCTACATGCATAATAATGCTTTGTCAGGTGCTATTCCTCCAACTCTTGGGAAATGTCAAAGTTTGCTTCTGTTGAATCTTAATCGAAACAATCTCAGTGGATCAATTCCTGGAGAGATCATGAGCATCCCATCCTTATCAATCTACTTGGGCATGTCTCAAAACAACTTGAATGGTCCTCTTCCTGTTGAAGTTATAGATTTTTCATACAATAATCTATCCGGAAACATTCCAGAATTTTTGGCAGATTTTGATTCACTCATGAGATTGAATCTATCCTTCAATGATTTTGTGGGAATGGTGCCAGAAAAAGGTATTTTTAAGAACTCAAGTGCAGCTTCAGTCGTAGGGAACAAATTATGTGGCGGCATTGCTGAACTTCAGCTGTCCAAATGCAACTTCAGAAACAGCAGAAAAGGAAGATTAACTCTTACCTCAAAGCTCATTATTGCAGCTTCTGTAACTGTTTGTGTTGCTTTGGCAATGcatattttgtatttcttgtATGCCAAGAAGATCAGAGTAAAACCCACTTCAAGCTCTTCTGTGAACTCACTCTTGCAAGTGTCTTACCAGAGTCTACTTGAAGCCACCAACAAATTCAGctcaactaatttaattgGAGTGGGCAGTTTTGGATCAGTCTACAAAGGCATTcttgaaaaggaagaaaagattgTTGCCATAAAGGTGTTAAACCTTGTAAACCCAAGAGCTTCCAAGAGTTTTCAAGCCGAATGTGAGGCCTTAAGGAACATAAGGCATAGGAATTTGGTTAAGCTAATAACAGCATGCTCTGGTGTTGATTATCAAGGAAATGATTTCAAGGCGCTGGTGTTTGAGTTCATGGCCTACGGAAGCCTGGAAGAGTGGTTGCATCCAATTATCAATCACCACAATCAGGCAGAAAGGTGTTTGAGCTTGCTTCAAAGACTTAATATTGCCATTGATGTAGCAAGCGCATTGGAGTATCTTCACCATTATTGTCAAACACCAATAGTTCATTGTGATCTAAAGCCAAGCAATGTAATCTTGGATGACAAAATGGTGGGACATATAGGAGATTTTGGTTTGGCGAGATTCTTCCACGAAACCTCTCCAAACAGTGCTGCTCCTCTCTCAAGCACAATTGGAATAAAAGGGACTATTGGCTATACTGCTCCAGGTTTGGCAAAAGTAGAAGAAGTTTTGGATCCATTTATTCTTgaggaaataaaaagagacATGAGCAGAAGGGATCCAAACAATCAGGGGAACTATGAGGTTGAGGAATGCTTGATTGCAATATTAGAAATAGGAGTAGCTTGCTCTGATGAATTTCCAAGTGAAAGGATGAGCATCATGGATGCAACAGCTCAGCTCAGTGCCGTTAAGAGAAAGCGTCTCAGTGGAGAGAATTA 2735 0.3949 MGNHIFSQKFKFTLCAAIEILLLCSVLGGSNETDQLALLDIKSKITDHPLGIMSSWNSSFHFCQWRGITCGKRHQRVTMLDLSSHSLQGSISAHLGNLTFLQFLHLYNNSFIGEIPPQIGNLHRLKVLDLYQNSLTGKIPANISGCSNLLVVSIGSNRLVGQVPLEFSTLTKLLIINIQLNNLTGEIPPFFGNFSDLEVLSITYNNFKGTIPDSVGQLKKLWFLAMGVNMLSGTVPPSIYNVSSMNSFTVEENKLHGTILSDLGNAFPSITNFNIGYNQFTGTIPASLSNASNLEIFTIANNGIGGKLPSLEKLQKLRWLSISINNLGTGSDGDLDFLNTVSNKTSLKLLAINSNNFGGSFPISITNFTSLSILTMDRNKLYGNIPAGIGNLVNLEMMYTDGNKFTGHIPEEIGKLKQLKKLDFEGNKLTGNIPSSLGNLTQLTHLYMHNNALSGAIPPTLGKCQSLLLLNLNRNNLSGSIPGEIMSIPSLSIYLGMSQNNLNGPLPVEVIDFSYNNLSGNIPEFLADFDSLMRLNLSFNDFVGMVPEKGIFKNSSAASVVGNKLCGGIAELQLSKCNFRNSRKGRLTLTSKLIIAASVTVCVALAMHILYFLYAKKIRVKPTSSSSVNSLLQVSYQSLLEATNKFSSTNLIGVGSFGSVYKGILEKEEKIVAIKVLNLVNPRASKSFQAECEALRNIRHRNLVKLITACSGVDYQGNDFKALVFEFMAYGSLEEWLHPIINHHNQAERCLSLLQRLNIAIDVASALEYLHHYCQTPIVHCDLKPSNVILDDKMVGHIGDFGLARFFHETSPNSAAPLSSTIGIKGTIGYTAPGLAKVEEVLDPFILEEIKRDMSRRDPNNQGNYEVEECLIAILEIGVACSDEFPSERMSIMDATAQLSAVKRKRLSGEN 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01634 911 Gene3D Transferase(Phosphotransferase) domain 1 728 843 - -
Bva08g01634 911 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 22 510 - -
Bva08g01634 911 SUPERFAMILY L domain-like 339 569 - -
Bva08g01634 911 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Bva08g01634 911 Gene3D Ribonuclease Inhibitor 153 264 IPR032675 -
Bva08g01634 911 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 22 510 - -
Bva08g01634 911 ProSiteProfiles Protein kinase domain profile. 646 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01634 911 Gene3D Ribonuclease Inhibitor 265 585 IPR032675 -
Bva08g01634 911 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 837 905 - -
Bva08g01634 911 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 509 834 - -
Bva08g01634 911 Gene3D Ribonuclease Inhibitor 33 150 IPR032675 -
Bva08g01634 911 Gene3D Phosphorylase Kinase; domain 1 626 727 - -
Bva08g01634 911 Pfam Leucine Rich Repeat 418 440 IPR001611 GO:0005515
Bva08g01634 911 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Bva08g01634 911 ProSitePatterns Protein kinases ATP-binding region signature. 652 675 IPR017441 GO:0005524
Bva08g01634 911 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 837 905 - -
Bva08g01634 911 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 509 834 - -
Bva08g01634 911 SUPERFAMILY L domain-like 32 327 - -
Bva08g01634 911 Pfam Protein kinase domain 648 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01634 911 SMART serkin_6 646 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01634 911 SUPERFAMILY Protein kinase-like (PK-like) 625 839 IPR011009 -
Bva08g01634 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672|GO:0006468
Bva08g01634 911 SMART LRR_typ_2 122 146 IPR003591 -
Bva08g01634 911 SMART LRR_typ_2 392 416 IPR003591 -
Bva08g01634 911 SMART LRR_typ_2 440 464 IPR003591 -
Bva08g01634 911 SMART LRR_typ_2 98 121 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01634 Bva-Chr8 8750813 8753935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01634 9 910 Receptor kinase-like Gene Family AT5G20480 38.883 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva08g01634 Pkinase 4.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01634 - - peu:105130519 1050.43