Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01631 ATGGGTaaccttgttttctttcagaAATCCAGGTTTCCCTTTTATGCAACCATTctgcttctcttcttttgcaCTGTCCATGGAGGAGGCAATGAAACTGACCAGCTAGCCTTACTTgaattcaagaaaaagataagTAATGACCCTCTTGGCATCATGAGCTCATGGAATTTATCGTATCATTTTTGCCAATGGCGTGGAATAACGTGTGGAAAACTCCATCAAAGAGTCACCATCCTTAACCTGAGCTCGCAGCGGCTGCAGGGTTCAATATCTCCATACATAGGCAACCTCACCTTTCTTCAAAGACTAAACCTGAACAACAATAGCTTCAATGGTGAAATTCCTCCTCAGATTGGCAATCTCCGCAGGCTACAGGTACTTCGACTAGATGAAAACTTGCTCAGCGGAGAAATTCCTTCCAACATATCTGGCTGCTCAAATCTACTATACATCAACCTTGGTTCCAACAGCTTTGTTGGACAGATTCCATCAGAGTTCGGTGCATTGACAAAGCTGCGTACTATAACTCTTGAATACAATAATCTAACTGGTGGGCTTCCTCCATATTTCGGAAACTTCTCGGACCTGGAGGGTATCTCAACAACTGTCAACAATCTCGGAGGTACCATTCCTGACAGCCTTGGACAGCTCAAGAAACTACTTTACCTGTTCATGGGTGGAAACTTGTTATCAGGAACCATACCTCCTTCAATATATAACCTGTCTTCGATGTATGTCTTATGTGTGCCACAAAACAAACTTCATGGGACAATACCCTCAGATTTGGGCAACATTTTCCCTAGAATGACCGAGTACAATATTGGTGACAACCTGTTTACTGGAACTATTCCAGCTTCCTTGTCCAATGCTTCCAACTTGGAAAGATTTACAATTGCCATTAACGGGATTAGTGGAAACATGCCTTCTTTGGAGAAGCTGCAAAAACTTTGGTGGCTGAGTATTTCCACCAACAATCTTGGAACAGGACGTGACGGTGATTTGGACTTCTTGAACACTGTGAGCAACAAAACTAGTTTGGAACGCATAGCCATAAATTCCAACAATTTTGGTGGGTCTTTTCCCATTTCCATCACCAACTTCACTAGTCTATCGATCTTGACCCTAGACAAGAATAATTTACATGGGAATATCCCTGCTGAGATAGGGAATTTAGTCAATTTGGAGTGGATGTATACTGGAGGCAACAAATTTACTGGTCATATTCCAGAAGAAATTGGAAAACTTATACAGCTAAAGAAGCTGGATTTTCAAGGAAATGGATTAACAGGTAATATTCCAGCATCTTTAGGAAACTTGACACAGTTGACCCATCTCTACATGTATAATAATTCTCTGTCAGGTGTTATTCCTCCCACTCTTGGAAAATGCCAAAGTTTGCTTCTGTTGAATCTTAATCAAAACAATCTCAGTGGACCAATTCCTAGAGAGATCATGAGCATCCCATCCTTATCAATCTACTTGGGCATGTCTCAAAACAACTTGAATGGTTCTCTTCCTCTAGAAGTAGGAACTCTCATAAATCTTGGAGTCTTGGATGTGTCTCATAACATGTTGTCTGGAGAAATCCCTCCCACTCTTGGGAGCTCCATAAGGTTGGAATTTCTATACATGCAACACAACTTCTTCCAAGGGAATATTCCTGAGTCGTTAAGTTCATTGAAAGGCATCCAGGTTATAGATTGTTCATACAACTACCTATCCGGAAACATTCCAGAATTTTTGGCAGATTTTGATTCACTCAGGAGATTGAATCTATCCTTCAATGATTTTGTGGGAATGGTGCCAGAAAAAGGTATTTTTAAGAACTCAAGTGCAGCTTCAGTCGTAGGGAACAAATTATGTGGCGGCATTGCTGAACTTCAGTTGTCCAAATGCAACTTCAGAAACAGCAGAAAAGGAAGATTAACTCTTACCTCAAAGCTCGTTATTGCAGCTTCTGCAACTGTTTGTGTGGCTTTGGCAATGtctattttgtatttcttgtATGCCAAGAAGATCAGAGTAAAACCCACTTCAAGCTCTTCTGTGAACTCACTCTTGCAAGTGTCCTACCAAAGTCTACTTGAAGCCACCAACAAATTCAGCTCAAGTAACTTAATTGGAGTGGGCAGTTTTGGATCAGTCTACAAAGGCATTcttgaaaaggaagaaaaggttGTTGCCATAAAGGTGTTAAACCTTGTAAACCCAAGAGCTTCCAAGAGTTTTCAAGCCGAATGCGAGGCCTTAAGGAACATAAGGCATAGAAATTTGGTTAAGCTAATTACAGCATGCTCTAGTGTTGATTATCAAGGAAATGATTTCAAGGCGCTGGTGTATGAGTTCCTGGCATATGGAAGCCTGGAAGAGTGGTTGCATCCAATCATCAATATCCAAGCTCAAATTCAAAGGAGTTTAAACTTGTTTCAAAGACTTAATATTCCCATTGATGTAGCTAGTGCATTGGAGTATCTTCACCATTATTGCGAACCACCAGTAGTTCACTGTGATCTAAAGCCAAACAATGTGCTCTTGGATGACCAAATGGTGGGACATATTGGAGACTTTGGTTTGGCGAGATTCTTCCTCAAAACCACCCAGAACAATGCTGCCCCTCTTTCAAGCACAATTGGAATACGAGGGACAATTGGTTATACTGCTCCAGAGTATGGTATGGGAAATGAAGTATCAAAATTAGGAGATGTGCATAGCTATGGCGTTCTCTTGCTAGAGATGTTCACAGGAAAGAGACCAACAGATGAAATGTTCAAAGATGGCATGAATCTTCATACTTATGCAAAGGCAAGTTTGCCAAAACTAGTAGAAGAAATTCTAGatccatttcttcttcaagaAGTAAAAGGAGACGTGAGCAGCAGAAAAGATCCACAAAATCAAGGGAACTATGTGATCGAGGAATGCTTGATTTCAATATTTGAAGTAGGAATAGCTTGTTCTGATGAATTTCCAAGTGAAAGGATGAGCATTAAGGATGCAACAGCTCAGCTCATTGGCGTTAAGGAAAAGCTTCTCAATTG 3041 0.3946 MGNLVFFQKSRFPFYATILLLFFCTVHGGGNETDQLALLEFKKKISNDPLGIMSSWNLSYHFCQWRGITCGKLHQRVTILNLSSQRLQGSISPYIGNLTFLQRLNLNNNSFNGEIPPQIGNLRRLQVLRLDENLLSGEIPSNISGCSNLLYINLGSNSFVGQIPSEFGALTKLRTITLEYNNLTGGLPPYFGNFSDLEGISTTVNNLGGTIPDSLGQLKKLLYLFMGGNLLSGTIPPSIYNLSSMYVLCVPQNKLHGTIPSDLGNIFPRMTEYNIGDNLFTGTIPASLSNASNLERFTIAINGISGNMPSLEKLQKLWWLSISTNNLGTGRDGDLDFLNTVSNKTSLERIAINSNNFGGSFPISITNFTSLSILTLDKNNLHGNIPAEIGNLVNLEWMYTGGNKFTGHIPEEIGKLIQLKKLDFQGNGLTGNIPASLGNLTQLTHLYMYNNSLSGVIPPTLGKCQSLLLLNLNQNNLSGPIPREIMSIPSLSIYLGMSQNNLNGSLPLEVGTLINLGVLDVSHNMLSGEIPPTLGSSIRLEFLYMQHNFFQGNIPESLSSLKGIQVIDCSYNYLSGNIPEFLADFDSLRRLNLSFNDFVGMVPEKGIFKNSSAASVVGNKLCGGIAELQLSKCNFRNSRKGRLTLTSKLVIAASATVCVALAMSILYFLYAKKIRVKPTSSSSVNSLLQVSYQSLLEATNKFSSSNLIGVGSFGSVYKGILEKEEKVVAIKVLNLVNPRASKSFQAECEALRNIRHRNLVKLITACSSVDYQGNDFKALVYEFLAYGSLEEWLHPIINIQAQIQRSLNLFQRLNIPIDVASALEYLHHYCEPPVVHCDLKPNNVLLDDQMVGHIGDFGLARFFLKTTQNNAAPLSSTIGIRGTIGYTAPEYGMGNEVSKLGDVHSYGVLLLEMFTGKRPTDEMFKDGMNLHTYAKASLPKLVEEILDPFLLQEVKGDVSSRKDPQNQGNYVIEECLISIFEVGIACSDEFPSERMSIKDATAQLIGVKEKLLN 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01631 1013 SMART serkin_6 702 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01631 1013 Gene3D Ribonuclease Inhibitor 268 334 IPR032675 -
Bva08g01631 1013 Gene3D Ribonuclease Inhibitor 193 267 IPR032675 -
Bva08g01631 1013 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 20 1012 - -
Bva08g01631 1013 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Bva08g01631 1013 SUPERFAMILY Protein kinase-like (PK-like) 681 1004 IPR011009 -
Bva08g01631 1013 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 20 1012 - -
Bva08g01631 1013 Pfam Protein kinase domain 704 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01631 1013 ProSiteProfiles Protein kinase domain profile. 702 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01631 1013 Gene3D Phosphorylase Kinase; domain 1 682 783 - -
Bva08g01631 1013 Gene3D Transferase(Phosphotransferase) domain 1 784 1012 - -
Bva08g01631 1013 SUPERFAMILY L domain-like 32 327 - -
Bva08g01631 1013 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Bva08g01631 1013 SUPERFAMILY L domain-like 344 625 - -
Bva08g01631 1013 Gene3D Ribonuclease Inhibitor 335 637 IPR032675 -
Bva08g01631 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Bva08g01631 1013 Pfam Leucine Rich Repeat 442 464 IPR001611 GO:0005515
Bva08g01631 1013 ProSitePatterns Protein kinases ATP-binding region signature. 708 731 IPR017441 GO:0005524
Bva08g01631 1013 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Bva08g01631 1013 SMART LRR_typ_2 218 242 IPR003591 -
Bva08g01631 1013 SMART LRR_typ_2 513 537 IPR003591 -
Bva08g01631 1013 SMART LRR_typ_2 170 193 IPR003591 -
Bva08g01631 1013 SMART LRR_typ_2 98 121 IPR003591 -
Bva08g01631 1013 SMART LRR_typ_2 392 416 IPR003591 -
Bva08g01631 1013 SMART LRR_typ_2 585 610 IPR003591 -
Bva08g01631 1013 SMART LRR_typ_2 122 146 IPR003591 -
Bva08g01631 1013 SMART LRR_typ_2 440 464 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01631 Bva-Chr8 8731731 8734856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01631 26 1010 Receptor kinase-like Gene Family AT3G47570 44.835 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva08g01631 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01631 - - peu:105130519 1325.84