Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01629 ATGTCTAACTCTGAAGGAACTACCACCAACGGCGTTACCAACGGCTCTATGATTGACCCACAGAGACAGCAGTCTGCCAGTAACGGTGCTCTCGCTGTGAAGAAGCCGCCGTCAAAGGACCGTCATAGCAAGGTCGATGGCCGTGGACGCCGTATTCGCATGCCGATCATATGCGCCGCACGTGTCTTCCAGCTCACACGTGAGTTGGGTCACAAATCCGACGGTCAAACCATCGAGTGGTTGCTCCGGCAAGCTGAGCCTTCCATCATAGCCGCCACAGGAACCGGTACAACTCCGGCTAGCTTCTCCACAGTGTCAGTCTCGGTTCGTGGTGGTGGGGGAAGTGTTTCCAGCTCATTATCCTCGTCTTCTGCTACTTCTACTTCTCTGGACCACAAGCCCCTTATGGGTCCAACACCCTTCATACTCGGCAAGCGTATACGGACCGATGATGACTCCGCCAAGGTTGATGGCGTATCCGTGGGACCCACTGTGGGCTCAATAGTGGGACCTACTACCCCGGCTGGGTTGTGGGCCCTTCCGGCGAGGCCTGACTTTGGACAGGTATGGAGCTTCGCCGCTGCAGCTCCGCCGGAAATGGTGGTGCAGCCGGCAGCAGTATCGGTGTCTCAGCAGCAGCAGGCATCTTTGTTTGTTCATCATCAGCATCAGCAGCAAGCCATGGGAGAGGCGTCGGCGGCGAGACTGGGAAATTACCTTCCAGGACACCTGAATTTGCTGGCTTCATTGTCGGGTGGGCCTGGAAATTCAAGCAGGAGAGACGAAGATCATCGTTG 797 0.5646 MSNSEGTTTNGVTNGSMIDPQRQQSASNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGGSVSSSLSSSSATSTSLDHKPLMGPTPFILGKRIRTDDDSAKVDGVSVGPTVGSIVGPTTPAGLWALPARPDFGQVWSFAAAAPPEMVVQPAAVSVSQQQQASLFVHHQHQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSSRRDEDHR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01629 265 ProSiteProfiles TCP domain profile. 38 92 IPR017887 -
Bva08g01629 265 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 262 IPR005333 GO:0003700
Bva08g01629 265 MobiDBLite consensus disorder prediction 113 133 - -
Bva08g01629 265 MobiDBLite consensus disorder prediction 1 31 - -
Bva08g01629 265 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 262 - -
Bva08g01629 265 MobiDBLite consensus disorder prediction 35 50 - -
Bva08g01629 265 Pfam TCP family transcription factor 38 128 IPR017887 -
Bva08g01629 265 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01629 Bva-Chr8 8709107 8711049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01629 13 265 TCP Transcription Factor Family AT5G23280 65.504 1.09e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva08g01629 TCP 9.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01629 K16221 - cpap:110813909 362.073