Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01620 ATGTCTCAGACATCCAGGGTCCCGCCTGCTTTCCAGTCTATCAAATCATTGCCTCCTGAATTCAAGCTTAGCGTTAATGCAACGCCAGGTCTTCTCAGAAGACAGGAAGATGCTAAGTTAGGGAGGAGTGAAGCAATCTCGTCAAGTATTCCCGAAAATGGTGCTCTAGGGAAGGTTTCTGAGGAAATTCTGGACTCTGCCGGTGACATGGATCTTTTTGATGAGGACTCACCATATGGCGATAAAACTATATCATTAGACAGCAGGCCCTCAATTGCAGATGAAGATACAGATTCTCTTCCTCTGCGCTTCCCATTAATCTCATCATTGTCTGGGGAACGGAGGTGGAGTGATACAACACCTTATGCAACAAAGAAGAAGCTTCAGTCTTGGTTTCAACTTCCAAATGCGAAGTGGGAGCTgggaaatataatttcaacatCAGGAACTGAATCTATTATTTCATTGCCTGATGGGAAGGTTTTGAAGGTGAAAACTGAAACTTTGGTACCAGCAAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAATGAACCTTCTGTGTTATACAATCTGCAATATagatataatcaaaatatgatttatACAAAAGCCGGGCCTGTTTTGGTTGCAGTAAATCCTTTTAAGAAAGTTCCTCTGTATGGAAATGATTATATTGATGCATACAAACGTAAAGCAATTGAAAGCCCTCATGTATATGCCATTACGGACACAGCCATCCGAGAAATGATTCGAGATGAAGtaaatcaatctataattATAAGTGGTGAAAGTGGAGCAGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAgagaatgaaatattaaagaCTAATCCAATACTAGAAGCTTTTGGTAATGCAAAAACATTGAGAAATGACAACTCGAGTCGTTTTGGAAAGCTCATTGAGATTCATTTCAGTGAAACTGGAAAAATATCTGGTGCTAATATTCAAACATTTTTGCTTGAAAAGTCAAGAGTGGTCCAATGCAATGAAGGGGAAAggtcatatcatatattttatcaactttGTGCTGGGGCGCCAAATTCTCTGAGGGAGAAGCTAAATCTAAAAAGTGTAGAGGACTATAAATATCTGAGACAAAGCAATTGTTATTCAATTTCTGGAGTAAACGATGCAGAAGAATTTCGTATAGTCACGGAAGCACTGGATGTTGTCCACATTGGAAAGGAAGACCAGGAGAATGTGTTTGCAATGCTAGCTGCAGTATTATGGCTTGGAAACATATCATTTACTGTAATTGATAACGAAAATCATGTTCAAGCTGTAGAAGATGAAGGTCTGCTCAACGTAGCTAAATTGATTTGCTGTGATATTGATGATCTCAAGTTGACTTTATCAACTCGAAAAATGAAAGTTGGTAATGATACTATTGTCCAAAAGCTGACGCTATCCCAGGCCATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGCCTGTTTGACTGGCTGGttgaacaaataaacaaatcacTTGCTGTTGGCAAAAGGCGTACTGGCAGATCAATCAGTATTCTTGACATATACGGTTTTGAATCATTTGAAAGGAACAGCTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGACTACAGCAGCACTTCAACCGTCATTTGTTTAAGTTAGAACAGGAGGAATATATACAAGATGGCATTGACTGGAATAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTGTTTGAAAAGAAACCACTGGGGTTACTATCCCTCTTAGATGAGGAGTCGACTTTCCCAAATGGCACGGATTTAACATTTGCAAACAAGTTGAAGCAACATTTGAAGTCTAATTCATGTTTCAAAGGAGAACGAGATAAAGCCTTTGCTGTGTGTCATTATGCAGGGGAGGTTACTTATGATACAACTGGATTTCTGGAGAAGAACAGGGACCTATTACACTTGGATTCCATTCAACTTCTATCCTCTTGCACGTGCCATCTGCCTCAGATATTTGCATCCCACATGCTTACTCAGACTGAGAAGCCTGTAGTTGGCCCCTTACACAAGTCAGGTGGAGCAGATTCACAAAAGCTAAGTGTTGCAACAAAATTCAAGGCTCAATTATTCCAACTGATGCAACGTTTAGAGAGCACCACACCACATTTTATTCGTTGCATTAAGCCCAATAACCTTCAGTCACCGGGATCATATGAGCAAGGGCTTGTACTACAGCAGCTGAGATGTTGTGGGGTTCTAGAAGTTGTTCGTATATCAAGATCAGGCTTTCCTACTAGAATGTCACACCAAAAGTTTGCTAGAAgATACGGTTTTCTTCTCCTTGAGAACGTTGCATCTCAGGATCCACTTAGTGTTTCAGTTGCAattcttcatcaatttaatattttgccAGATATGTATCAAGTTGGCTAcaccaaattattttttcggACAGGACAGATTGGGGTGCTTGAAGATACTCGAAATCGTACCCTTCATGGTATTTTACGAGTTCAAAGCTGCTTCAGGGGTCACCAAGCTCGTTGTTATCTGAAGGATCTCCGACGAGGAATAACTACTCTTCAGTCatTTGTTAGGGGAGAGAAAGCCAGAAAGGAATATGCATCTTCAATTCAGAGACATAGAGCTGCTGTTATTATACAGAAGCGGATGAAAGGAGTCTATACAAGAAACAGAATGAAGAATACTAATGATGCTGCAATAGTCATACAATCAGTTATTCGTGGTTGGCTAGTCAGACGATGCTCAGGAGATATAGGATTACTGAAATCCGGAGGCACGAAGGTTAATGAGTCAGATGAGGTGTTGGTGAAGGCTTCCTTCCTAGCAGAATTACAGCGACGGGTACTCAAGGCAGAAGCTGccttgagagaaaaagaagaagaaaatgacatcCTTCATCAACGTCTCCAACAGTATGAGAACCGTTGGTCTGAGTATGAATTGAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTCCAATCTAGCCTCTCAATTGCAAAGAAGAGCCTCGCCGTGGATGATTCTGAAAGAAATTCGGATGCATCTGTAAATGCAAGCGATGATTGGGACACGGCTAGTAATCACAGGCGCCAAGAAAGCAATGGGGGAAGATCAATGAGTGCAGGTTTGAGTGTTATAAGTCGGTTGGCTGAAGAGTTTGAGCAAAGGAGTCAAGTATTTGGCGACGATGCAAAGTTCTTGGTTGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGAACCCAGACAAGGAGCTTAGAAGGTTGAAGCAGATGTTTGAAGCGTGGAAGAAAGATTACGGGGCGAGATTGCGAGAAACTAAGGTGATTCTGAACAAGCTTGGAAGTGAAGAAGGTGCAAttgacaaaatgaaaaagaaatggtggGGTAGAAGGAATAGTACAAggataatttg 3515 0.3889 MSQTSRVPPAFQSIKSLPPEFKLSVNATPGLLRRQEDAKLGRSEAISSSIPENGALGKVSEEILDSAGDMDLFDEDSPYGDKTISLDSRPSIADEDTDSLPLRFPLISSLSGERRWSDTTPYATKKKLQSWFQLPNAKWELGNIISTSGTESIISLPDGKVLKVKTETLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAVNPFKKVPLYGNDYIDAYKRKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIENEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPNSLREKLNLKSVEDYKYLRQSNCYSISGVNDAEEFRIVTEALDVVHIGKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLLNVAKLICCDIDDLKLTLSTRKMKVGNDTIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFERNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWNKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLKSNSCFKGERDKAFAVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCHLPQIFASHMLTQTEKPVVGPLHKSGGADSQKLSVATKFKAQLFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPDMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHQARCYLKDLRRGITTLQSFVRGEKARKEYASSIQRHRAAVIIQKRMKGVYTRNRMKNTNDAAIVIQSVIRGWLVRRCSGDIGLLKSGGTKVNESDEVLVKASFLAELQRRVLKAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDWDTASNHRRQESNGGRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDKELRRLKQMFEAWKKDYGARLRETKVILNKLGSEEGAIDKMKKKWWGRRNSTRII 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01620 1171 ProSiteProfiles IQ motif profile. 924 953 IPR000048 GO:0005515
Bva08g01620 1171 ProSiteProfiles Myosin motor domain profile. 178 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva08g01620 1171 PANTHER MYOSIN 9 1170 - -
Bva08g01620 1171 SMART iq_5 874 896 IPR000048 GO:0005515
Bva08g01620 1171 SMART iq_5 900 922 IPR000048 GO:0005515
Bva08g01620 1171 SMART iq_5 851 873 IPR000048 GO:0005515
Bva08g01620 1171 SMART iq_5 923 945 IPR000048 GO:0005515
Bva08g01620 1171 MobiDBLite consensus disorder prediction 1042 1073 - -
Bva08g01620 1171 Gene3D Kinesin motor domain 177 783 IPR036961 -
Bva08g01620 1171 CDD MYSc_Myo8 192 838 IPR036022 -
Bva08g01620 1171 Gene3D - 854 902 - -
Bva08g01620 1171 Gene3D - 903 944 - -
Bva08g01620 1171 Pfam IQ calmodulin-binding motif 856 873 IPR000048 GO:0005515
Bva08g01620 1171 Pfam IQ calmodulin-binding motif 876 895 IPR000048 GO:0005515
Bva08g01620 1171 Pfam IQ calmodulin-binding motif 926 942 IPR000048 GO:0005515
Bva08g01620 1171 ProSiteProfiles IQ motif profile. 854 881 IPR000048 GO:0005515
Bva08g01620 1171 ProSiteProfiles IQ motif profile. 875 904 IPR000048 GO:0005515
Bva08g01620 1171 Gene3D - 360 416 - -
Bva08g01620 1171 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 125 174 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva08g01620 1171 Gene3D - 548 740 - -
Bva08g01620 1171 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 1170 - -
Bva08g01620 1171 ProSiteProfiles IQ motif profile. 901 927 IPR000048 GO:0005515
Bva08g01620 1171 Gene3D Myosin VI head, motor domain, U50 subdomain 417 525 - -
Bva08g01620 1171 SMART MYSc_2a 172 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva08g01620 1171 Gene3D - 784 851 - -
Bva08g01620 1171 PRINTS Myosin heavy chain signature 262 287 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva08g01620 1171 PRINTS Myosin heavy chain signature 589 617 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva08g01620 1171 PRINTS Myosin heavy chain signature 536 564 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva08g01620 1171 PRINTS Myosin heavy chain signature 304 331 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva08g01620 1171 PRINTS Myosin heavy chain signature 208 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva08g01620 1171 Coils Coil 970 1018 - -
Bva08g01620 1171 Pfam Myosin head (motor domain) 180 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva08g01620 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 896 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01620 Bva-Chr8 8559394 8579128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01620 6 1169 Myosins gene family AT1G50360 76.451 0.0 1826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01620 - K10357 gmx:100801124 2017.66