Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01605 ATGGATCAGAGCTCGTACCGAACCCGAAAATCCCGAGCCAAATCCGAGCTATACTCCACCGTGGTGGTGCACGATGATGAAGGCGACGATAAGCGACGGAAGCCTAGAAACACGGGGCCCGATGAGGATTTATATGCAACAATGGTGTACAAAGGCAATGGACAGGAAGAAGACGAAGATGATGACTCCTCTCTCCCTCCCCTCCTTAAGCGCCTACCCAAAGACTTCGGTGGTGGTGCCCCTATGGACTACGACAACGATTTTGAAGAAGAGACCGGCGACTTTGGCACAATGATTGTGAAGACCGGGCAACGAAATCGGTCCTCTTCGTCGTTGTCCTCCATGGGTTCGACCTGGAAGGCTCGAAGCTCTCCCTATATGCAGGCGAGCCCGGGAAAGAGAGTCGCTAGTGGggttgatgaagaagaagatggtgATGATAACGATGGATTCTCAACCTTTGTAGTGCGGTCTTCGACCAAATCCAGTGAAAGAGAGTCGGTGAGTGGAACAATGGTGCGGAGGACGAGTGGTGGTTCTGGCGGTACAATTGGTGCTGGGTCGACAATGGAAAGAGCGGTGGCGAGTATGCAGGCTTTGGGGGAGCGGGGATTTGGGAAACAGAGGAAGGGAAGTGGGTCCTCGCTGAATGAGGAGGCTAGGCAATCGATAGCGGCGAAGATTTCGTCGAGTTCGATCCCAGAAAGTGTTACCGGAGAGGATCCTACATCCAAGTACGAATTGCTCAATGAACTTGGGAAGGGATCCTACGGAGCTGTTTACAAAGCTAGGGATTTTAGAACCTCGGAGCTGGTCGCTATCAAAGTCATATCACTAACTGAAGGAGAGGAGGGATATGAGGATATCCGTGGTGAAATTGAGATGTTGCAGCAATGTAATCATCCAAATGTAGTTCGTTATCTCGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTTATGGAGTACTGTGGTGGTGGTAGTGTTGCTGGCTTGATGAACGTGACTGAGGAGCCATTGGATGAGGGTCAAATAGCGTATATCTGTAGAGAAGCTTTGAAGGGCCTTGACTATTTGCATTCAATTTTCAAGGTCCATAGAGACATTAAAGGCGGTAATATCTTATTAACTGAACAGGGAGATGTCAAGCTGGGGGATTTTGGTGTTGCTGCACAGCTGACCAGGACCATGTCTAAGCGCAATACGTTCATTGGAACCCCTCACTGGATGGCTCCAGAAGTAATTCAGGAAAGCCGCTATGATGGGAAGGTAGATGTATGGTCTCTTGGCGTGACTGCAATTGAAATGGCAGAGGGCCTTCCACCAAGATCAGCAGTGCATCCAATGAGGGAAAATAAGGGAAGAGACAAGGGAGAGTGTGAGgTGTTATTCATGATTTCCATCGAACCAGCACCGATGCTTGaggataaagaaaaatgGTCTCTTTATTTCCATGATTTTGTTGCCAAGTGCCTTACCAAAGAACCTCGTCTACGCCCAACTGCATTTGAGATGCTAAAGcataaattatttgacaaatgGAAAACTGGAGCTTTTTTGATGATGCCAAAACTTGAAAAGGCAAGGCAAGTCCGGGCTGAGGCTCTGCAGGTCCAAACTCTTGCTCCAGCTGCATTAGAAGATCAGCCAACAGTAGCTGAAAAGCTGAATGATGGATATGGAGGTACTGTTCCATCACGACGTCATAATATTGGAGTTGGGGGGGTAGACGATCTCTCTTCAGACAGCACTCTGAGGAAGCTACATAAATTGGAAAATGTGGAAATGGGTGAAGGTTACTTTGGCACTGTAATAATCCATGAAGGAGAGGAGGTAGATATGAAAGATTCTGCAGATTCTTCATCTGCTTCCTTCATTACTAGCACAGGAAGCAAATCGGCTGACTCAGGGGTTGGGAGTTTAAATTATGCTGCGGCAAACAATGCCTCTGTCAGAGGATCCAGTACTGTTGATGCCGTACAGACAACTTTACCTCCCCCTAACAATGCAACAGAGCACAACCTCAAAATCAAAGGTGCTTTTCGAGCACAAGTTGGAATCAGCACTATGAGGAATGAATCCATCAACCGCAGAGCATTTGCTTTGCAAGATAAGCTTTTGTCCATTTATGCTGCTGGTAATACGGTACCTATTCCATTCTTAAGGGCGACAGATGTATCACCCATTGCTCTCCTGTCAGATAATGTGCTTGGAGGAATGCAACAGCAGCCCAGTGGAGCTGCAACTGTTGAGGCATTGCAAGAGCTTTTTAGTGGGGATGGCCAGTCCAAGAAGGGTCGGAGAGGACAAATGGAGATGCCACTACCTCCAAGCATTTATCAGAGACTAACATCAAGTCCTACAATATTGAATTTGGCACAAGCTTTAGCTTACCATAAAACgtCTTATGAAGATATGCCACTCCAGGAGAGGCAAGCAACTGAAGCACAGCAGACCATTCAAAATCTTACTGACACACTTCGTACTATTATTCGTTTGTA 2501 0.4618 MDQSSYRTRKSRAKSELYSTVVVHDDEGDDKRRKPRNTGPDEDLYATMVYKGNGQEEDEDDDSSLPPLLKRLPKDFGGGAPMDYDNDFEEETGDFGTMIVKTGQRNRSSSSLSSMGSTWKARSSPYMQASPGKRVASGVDEEEDGDDNDGFSTFVVRSSTKSSERESVSGTMVRRTSGGSGGTIGAGSTMERAVASMQALGERGFGKQRKGSGSSLNEEARQSIAAKISSSSIPESVTGEDPTSKYELLNELGKGSYGAVYKARDFRTSELVAIKVISLTEGEEGYEDIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVAGLMNVTEEPLDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWSLGVTAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTAFEMLKHKLFDKWKTGAFLMMPKLEKARQVRAEALQVQTLAPAALEDQPTVAEKLNDGYGGTVPSRRHNIGVGGVDDLSSDSTLRKLHKLENVEMGEGYFGTVIIHEGEEVDMKDSADSSSASFITSTGSKSADSGVGSLNYAAANNASVRGSSTVDAVQTTLPPPNNATEHNLKIKGAFRAQVGISTMRNESINRRAFALQDKLLSIYAAGNTVPIPFLRATDVSPIALLSDNVLGGMQQQPSGAATVEALQELFSGDGQSKKGRRGQMEMPLPPSIYQRLTSSPTILNLAQALAYHKTSYEDMPLQERQATEAQQTIQNLTDTLRTIIRL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01605 822 SMART serkin_6 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01605 822 MobiDBLite consensus disorder prediction 1 90 - -
Bva08g01605 822 MobiDBLite consensus disorder prediction 102 187 - -
Bva08g01605 822 ProSiteProfiles Protein kinase domain profile. 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01605 822 MobiDBLite consensus disorder prediction 1 40 - -
Bva08g01605 822 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
Bva08g01605 822 MobiDBLite consensus disorder prediction 102 125 - -
Bva08g01605 822 MobiDBLite consensus disorder prediction 152 184 - -
Bva08g01605 822 CDD STKc_MAP4K3_like 245 500 - -
Bva08g01605 822 Pfam Protein kinase domain 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01605 822 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 188 812 - -
Bva08g01605 822 SUPERFAMILY Protein kinase-like (PK-like) 242 501 IPR011009 -
Bva08g01605 822 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 188 812 - -
Bva08g01605 822 Gene3D Transferase(Phosphotransferase) domain 1 242 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01605 Bva-Chr8 8469255 8478122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01605 1 822 MAP Kinase Kinase Kinase Kinase AT1G69220 57.674 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Bva08g01605 Pkinase 2.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01605 - - gmx:100804995 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01605 08 8469255 8478122 Bva08g01605 08 8469255 8478122 ECH