Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01594 ATGGGTGATGCTGATGAAGggagaagaaacaaagcaaTGGAGAATTTCTCTTTGCAGATAGATAAGCACCCGAGAGATCTATTGCAGAGATTCATGTCAAGTAGTAGCACAGAGCAATCCGAACGTGCAGAGCATCGTGAAGAATCGGAAGATATTGAGCTGAATCTTGGCCTTTCATTGGGTGGCCGATTTGGGGTTGATAAGAATGCTAAGAAGCTCATGCGATCATCGTCTATTGTGGGGACAATGCCTGTGGTTAGAGACGACGACTCCATTGCTCCACCGCCGGCGACGTACCCGACTCTAATGAGGACTTCTTCTCTTCCGACGGAGACGGAGGAGCAGTGGCGGAAGAGAAAGGAGTTGCAAACATTGAGGAGAATGGAGGCAAAAAGGAGGCGGTCAGAGAAGCATAGAAATTCTAAGACCGAGAGAGAAGGCAGCAGCGGTGGTTTGGAAGAAGAAAGGCGGGAAATTGAGGGTGCAACTGGGTTGAATTTAAGAGAGAGGCGGTTTGGTTCTGCGGCGTCGCCACCTTTTGGGTTGCCCGGTTGGGCTGCAGCAGCTAGACCAGTGGTGCTTGGTGATGTTTTGGCCAAAGGGAACGTTGATTATCAGGGATATGGACAACCATCTTCTCAAGGTTCAATGGATTCTCAGGGGAAGAGTTCATCGGGAATGTCAGAAATGGAGAGTAAACCTTTTCAAGGCGAAGCAAGAAGCCCGGCTAGCAATCAGTCAATGCAGGAAAGAAGCAACGAAGAAGGTGCGGGTTCATCAGGGGCAAAGGCAAATGAGAATGTGACAAGAAGTTGCAGAGCTGAAACTGAGAATCCAGTTAGCAGAAGTGCCAAAAATAGAGGGAGAGAAATTGGGACAAACTCGATGGAGGACATGCCTTGTGTTTTCACAAAAGGGGATGGCCCCAATGGAAAAAGAATAGAGGGAATCTTATACAGATATGGTAAAGGAGAGGAAGTGAGGATAATGTGTGTGTGCCATGGCAATTTTCTGTCTCCGGCTGAGTTTGTTAAGCATGCTGGCGGTGGTGATGTTGCTTACCCGCTTAGACACATTGTTGTAAACCCTTCATCTTCTCCCTTTTTGTG 1109 0.4734 MGDADEGRRNKAMENFSLQIDKHPRDLLQRFMSSSSTEQSERAEHREESEDIELNLGLSLGGRFGVDKNAKKLMRSSSIVGTMPVVRDDDSIAPPPATYPTLMRTSSLPTETEEQWRKRKELQTLRRMEAKRRRSEKHRNSKTEREGSSGGLEEERREIEGATGLNLRERRFGSAASPPFGLPGWAAAARPVVLGDVLAKGNVDYQGYGQPSSQGSMDSQGKSSSGMSEMESKPFQGEARSPASNQSMQERSNEEGAGSSGAKANENVTRSCRAETENPVSRSAKNRGREIGTNSMEDMPCVFTKGDGPNGKRIEGILYRYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAYPLRHIVVNPSSSPFL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01594 369 MobiDBLite consensus disorder prediction 208 231 - -
Bva08g01594 369 MobiDBLite consensus disorder prediction 86 162 - -
Bva08g01594 369 PANTHER AFP HOMOLOG 2 20 366 IPR031307 GO:0007165
Bva08g01594 369 MobiDBLite consensus disorder prediction 139 162 - -
Bva08g01594 369 Pfam Tify domain binding domain 327 361 IPR032308 -
Bva08g01594 369 MobiDBLite consensus disorder prediction 208 304 - -
Bva08g01594 369 MobiDBLite consensus disorder prediction 32 51 - -
Bva08g01594 369 MobiDBLite consensus disorder prediction 238 281 - -
Bva08g01594 369 MobiDBLite consensus disorder prediction 1 24 - -
Bva08g01594 369 MobiDBLite consensus disorder prediction 111 130 - -
Bva08g01594 369 PANTHER NINJA-FAMILY PROTEIN AFP1 20 366 - -
Bva08g01594 369 Pfam Putative nuclear localisation signal 102 232 IPR032310 -
Bva08g01594 369 Pfam Ethylene-responsive binding factor-associated repression 47 81 IPR012463 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01594 Bva-Chr8 8391481 8395084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01594 - - jre:109014379 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01594 08 8391481 8395084 Bva08g01594 08 8391481 8395084 ECH