Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01586 ATGCTTTCTTACAGAATGGCGAGAAAATTTGCGTGCTTTCTTCCTCATAGACGCTTCTCTTCCATCCCTGAAGTTCCCTCACTCTACTCCTTCCTTCAACCCTCTCTTTTTGCCTTGAAACGAAACCCACCAGATTCTCAAGAACCCATCAAGCTGCCAACTTCACCCCCAAAATCCCTAACCCTTGAGCAAGTAACAACTCTACAAAATGCCCTTCACAAGTCTCTTATCGCCAGCGACACTGACGAGGCATGGAAGTCTTTCAAGGCTCTCATAAATAACTCAGCTTTCCCAAGCAAGTCAATTACCAATTCTCTGATAACCCATTTGTCTTCACATGGTGATATTTACAATTTCAAGAGAGCTTTTGCATCTGTTGTATATGTTATAGAGAAGAATCCAAAGGTGTTAGAATTTGAGACAGTTCAAATAATGCTTAATTCTATGAAATGTGCCAACGTTGCTGCCCCTGCTTTTGCTCTTGTCAAGTGCATGTTCAAGAACAGGTTTTTCATTCCATTCAGTGTTTGGGGCAATGTGCTAGTTGAAATTAGTCGTAAGAATGGTAATTTGGTGGCATTTTTGCGCTTATTTGAGGAGAACTGTAAGATTGCTTGGGATGAGAAGTTGGAATTCATGAAACCTGACCTTGCTGCTTGTAATGCAGCACTGGAAGGGTGTTGTCATGACCTTGAATCAGTGAGCAATGCTGAAAGTGTTGTTGAAACAATGTCACTTTTGGGTGTTAGACCAGATCAGTCGAGCTTTGGATTTCTTGCTTATTTGTATGCCTTGAAGGGActtgaagaaaagataaatgagTTAGAAGCTTTGATGGGTGGGTTTGGTTTCACAAACAAAAAGGAGTTCTATTGTAATTTAATCAGTGGGTATGTTAAGTCTGGCAATTTGGCATCTGTTGAGTCAACTATTCTCAGAAGtctgaaagatgaaaattgcaAGTGTGGGCATTTTAGTGTAGAAACTTACTCTGAAGTAGTTAATGGATATGTTCAGAAGGGAAATATCAAGGGATtagcaaatttaattattgaatctCAGAAGACAGAGCCTGCAAATATCTTGGTTGATGAATCTTTAGGCTATGGTATTGTTAGTGCATGTGTTAGTATTGGATTATCAGACAAGGCACACAGCATTCTTGACGCAATGAATGCTTTGGGAGGCTCTGTGGGTCTTGGTGTCTATGTGCCAATCTTGAAGGCTTACTGCAAAGAAAATCGAATTGTAGAAGCTACTGAATTAGTCATGAAGATTAGTAGTTCAGGTCTTCAATTGGATGTAGGATCTTATGATACTCTCATAGAAGCATCCATGGCCGGCCAAGATTTCCGATCAGCCTTTTCACTGTTTAGGGATATGAGAGAAGCAAGAATTTCAGACTTGAAAGGGAGTTACCTAACCATTATGACAGGTTTGATGGAGAACCACCGACCTGAGTTGATGGCAGCTTTTCTGGATGAGGTGGTTGAAGACCCTCGAATTGAAGTGAGTACTCATGACTGGAATTCTATCATTCATGCTTTCTGTAAAGCTAGGAGACTAGAAGATGCAAGAAGGACGTTCAGAAGGATGATCTTCCTCCAATTTGAGCCGAATGACCAGACATACTTGTCCCTAATTAATGGTTATGTCTCTGTAGAGAATTATTTTAGTGTTCTAATGCTGTGGAATGAGGTGAAACGAAAGTTATCAAGTGATGGACAGAAGGGGGTCAAATTTGATCACAGCTTGGTTGATGCGTTTTTGTATGCTATGGTCAAAGGAGGTTTCTTTGATGCAGCTATGCAAGTTGTAGAGAAATCTACTGAGATGAAGGTGTTTGTTGATAAGTGGAGATACAAGCAAGCATTCATGGAGACCCATAAGAAGCTCAAAGTGGCGaagttgagaaaaagaaacttaagaaaaatggaagcaCTTACTGCCTTTAAGAATTGGGCTGGCTTAAGTGCATG 1979 0.3896 MLSYRMARKFACFLPHRRFSSIPEVPSLYSFLQPSLFALKRNPPDSQEPIKLPTSPPKSLTLEQVTTLQNALHKSLIASDTDEAWKSFKALINNSAFPSKSITNSLITHLSSHGDIYNFKRAFASVVYVIEKNPKVLEFETVQIMLNSMKCANVAAPAFALVKCMFKNRFFIPFSVWGNVLVEISRKNGNLVAFLRLFEENCKIAWDEKLEFMKPDLAACNAALEGCCHDLESVSNAESVVETMSLLGVRPDQSSFGFLAYLYALKGLEEKINELEALMGGFGFTNKKEFYCNLISGYVKSGNLASVESTILRSLKDENCKCGHFSVETYSEVVNGYVQKGNIKGLANLIIESQKTEPANILVDESLGYGIVSACVSIGLSDKAHSILDAMNALGGSVGLGVYVPILKAYCKENRIVEATELVMKISSSGLQLDVGSYDTLIEASMAGQDFRSAFSLFRDMREARISDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVSTHDWNSIIHAFCKARRLEDARRTFRRMIFLQFEPNDQTYLSLINGYVSVENYFSVLMLWNEVKRKLSSDGQKGVKFDHSLVDAFLYAMVKGGFFDAAMQVVEKSTEMKVFVDKWRYKQAFMETHKKLKVAKLRKRNLRKMEALTAFKNWAGLSA 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01586 659 PANTHER OS01G0788900 PROTEIN 11 658 - -
Bva08g01586 659 Gene3D Tetratricopeptide repeat domain 61 362 IPR011990 GO:0005515
Bva08g01586 659 PANTHER BNAC05G43320D PROTEIN 11 658 - -
Bva08g01586 659 Gene3D Tetratricopeptide repeat domain 468 633 IPR011990 GO:0005515
Bva08g01586 659 Gene3D Tetratricopeptide repeat domain 363 467 IPR011990 GO:0005515
Bva08g01586 659 TIGRFAM PPR: pentatricopeptide repeat domain 509 540 IPR002885 -
Bva08g01586 659 Pfam Pentatricopeptide repeat domain 422 467 IPR002885 -
Bva08g01586 659 Pfam PPR repeat family 508 552 IPR002885 -
Bva08g01586 659 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 505 539 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01586 234 570 Glycosyltransferase AT1G05670 22.647 2.12e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01586 - - mdm:103416493 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01586 08 8342040 8344687 Bva08g01586 08 8342040 8344687 ECH