Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01581 ATGGCGTCAATGGCGATCTTAGCTCGAACACGGTCCTTAATCAAATCCCTAAATTCTTACTCCACTTCCAGGAGCATCACCACCTTCACTTTCCTCTCTCAGGAACCTCAACTCGCTGAGCCTTCTACTGCCACTCCTACCTCACTTCCTCCCAACCCTGCCACTGGTAGCCCTCTCTACAATGAGAATTGGCGTAATCCATATGCTTCTGCTGTTTCAGCTCATTCAGTGGTCCCGCAAGGGTTTTTCAACCAAACACCAAGCGCTCAAATCCTGGCAATGTCCCGGACCCATGATGTTCAGAGCTTGATGAATGTATTCGCTGATTGGATGGCTTCGCAGCGCTGGGATGATATCAAGCTCTTGTTCGAGTCTTGGGTGAGGTCGCTCGATAAGAATGGGAAGCCGAATAAACCTGATGAGCATTTGTTTAATCATTATCTGAGAGCGAATTTGATGATTGGGGCTTCTGCTGGGGAGTTGCTTGACTTGTTAGCTCAAATGGAGGACTTTAAGATCAAACCCAACACTGCTTCATTTAATTTGGTGCTCAAAGCAATGCACCAGTCCCAGGAGACTGAGGCTGCCGAGAGATTGCTGGAACGGATGTTGCTAACTGGGAAGGAATCTCTCCCTGATAATGAGTCGTATGACTTGGTCATTGGAATGCTGTTTTCAACTGACCAGGTTGATTCCGCATTGAAATATATAGATTTGGCTTTGAAATCTGGTTATGTGATGTCAATGGACGTGTTCATGGATAGTCTGCGAAGATGTGTCAATAATGGCAGGCTAGATACAGGGGTGACAATTATTGAAAGGTGCAAGGCAATGGATCAAAACAAAGCTCTTTGCCCGTCCTGGAATTTGTGCAAATTGATAGCTGATTCTGCAATGCAACAGGATAATAGCAAGTTAGCTTATTATGCACTGGAGTTTATGGCCAGGTGGATTGTCAAGGGTGAGCAAGCAAGACCATCCGTCTTGCTATCTGTAGATGAAGGTTTGATTGTGTCAGCACTTGGGGCTGCTGGTAGAACCTACAGTTCCGATCTGCTGGATGCATCATGGGCTATTTTGCGTCGCTCATTGCGGCAAAAAAGGGTTCCTAACCCAGAATCTTATATTGCAAGGATACATGCCCTCGCTACATTGGGGAATTTACAAAGGGCTTTTGGTGCATTACATGAATTTGAGTCTGCTTATGGAGATTCCAGTCAAGAAGCTGAAGAAATGTTCTCTCCCTTCACATCTTTACATCCATTGGTTTTGGCGTGCTCCAAGAAAGGCTTTGAGACTTTGGATGCTGTTTATTTTCAACTGGAGAATTTAAGTCGTGCAGAGACTCCTTATAAATCTGTTGCTGCACTAAACTGCGTCATATTAGGGTGTGCAAATATATGGGATCTTGATCGTGCCTACCAAACATTTGAAGCAATTGGATCCACTTTTGGGTTGACCCCTGATATTCATTCATACAATGCCCTGATGCATGCATTTGGGAAGCTCAAGAAGACACATGAAGCTTCGAAGGTTTTTGAGCACTTTGTAGGTGTGGGTGTTAAGCCCAATGCAACTTCTTACTCAGTGCTTGTTGATGCCCACCTCATAAATCGGGATGTTAAATCTGCTCTAGCTGTGATTGACGATATGGTGGCTGCTGGATATGAACCATCAAAAGAGATACTTAAAAAGGTGAGAAGGCGATGCATGCGTGAGATGGACTATGAGAGTGATGACCGGGTGAATTCACTGGCTAGATCTTATAAAATCCGAATGGGTTCAGAAGCTCGCCGAGATCTGCTATTTAATCTGGTGTACAGCACGGGTTACACTTA 1838 0.4483 MASMAILARTRSLIKSLNSYSTSRSITTFTFLSQEPQLAEPSTATPTSLPPNPATGSPLYNENWRNPYASAVSAHSVVPQGFFNQTPSAQILAMSRTHDVQSLMNVFADWMASQRWDDIKLLFESWVRSLDKNGKPNKPDEHLFNHYLRANLMIGASAGELLDLLAQMEDFKIKPNTASFNLVLKAMHQSQETEAAERLLERMLLTGKESLPDNESYDLVIGMLFSTDQVDSALKYIDLALKSGYVMSMDVFMDSLRRCVNNGRLDTGVTIIERCKAMDQNKALCPSWNLCKLIADSAMQQDNSKLAYYALEFMARWIVKGEQARPSVLLSVDEGLIVSALGAAGRTYSSDLLDASWAILRRSLRQKRVPNPESYIARIHALATLGNLQRAFGALHEFESAYGDSSQEAEEMFSPFTSLHPLVLACSKKGFETLDAVYFQLENLSRAETPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSTFGLTPDIHSYNALMHAFGKLKKTHEASKVFEHFVGVGVKPNATSYSVLVDAHLINRDVKSALAVIDDMVAAGYEPSKEILKKVRRRCMREMDYESDDRVNSLARSYKIRMGSEARRDLLFNLVYSTGYT 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01581 612 TIGRFAM PPR: pentatricopeptide repeat domain 491 525 IPR002885 -
Bva08g01581 612 TIGRFAM PPR: pentatricopeptide repeat domain 527 559 IPR002885 -
Bva08g01581 612 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Bva08g01581 612 Gene3D Tetratricopeptide repeat domain 90 327 IPR011990 GO:0005515
Bva08g01581 612 Gene3D Tetratricopeptide repeat domain 417 597 IPR011990 GO:0005515
Bva08g01581 612 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 524 558 IPR002885 -
Bva08g01581 612 Pfam PPR repeat family 488 534 IPR002885 -
Bva08g01581 612 PANTHER OS07G0599000 PROTEIN 2 611 IPR044605 -
Bva08g01581 612 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01581 Bva-Chr8 8309743 8313860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01581 353 559 Glycosyltransferase AT1G05670 25.121 3.43e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01581 - - qsu:111999636 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01581 08 8309743 8313860 Bva08g01581 08 8309743 8313860 ECH