Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01578 ATGTCGACcgagaaggagagagagacCCACGTTTACATGGCCAAGCTCGCTGAACAGGCCGAGAGATATGACGAAATGGTAGACTGTATGAAGAAGGTAGCAAAACTTGATCTTGAGCTGACTGTGGAAGAGAGGAACCTCCTTTCTGTGGgatataaaaatgttattggTGCACGACGTGCATCCTGGCGCATTATGTCATCAATTGAGCAGAAGGAGGAATCTAAAGGAAATGAGCACAATGTTAAATTGATCAAGGGTTACCGCCAAAAGGTCGAGGACGAACTCTCCAAGATTTGCCAGGATATATTGACAATTATCGACCAGCATCTGATTCCCTCTTCCACCTCGGGAGAAGCCACTGTTTTCTACTATAAGATGAAGGGTGACTATTATCGGTATCTTGCTGAATTCAAGACCGATCAGGATAAGAAAGAGGCAGCGGAGCAGTCACTGAAAGGATATGAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACTCACCCAATCCGTCTTGGCCTTGCACTCAACTTCTCAGTGTTTTACTATGAAATAATGAATTCTCCTGAAAGGGCCTGTCATTTGGCTAAACAAGCCTTTGATGAGGCAATTGCGGAGTTGGATACCTTGAGTGAAGAGTCATACAAGGACAGCACCTTGATCATGCAGTTGTTGAGAGATAACCTCACTCTCTGGACATCTGATTTGCCTGAGGATGGAGGTGAAGAGAACGCAAAAGGTGAAGAATCCAAAGATTCCAAACCTGCTGAACCTGAGCACTG 788 0.4353 MSTEKERETHVYMAKLAEQAERYDEMVDCMKKVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKGYRQKVEDELSKICQDILTIIDQHLIPSSTSGEATVFYYKMKGDYYRYLAEFKTDQDKKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENAKGEESKDSKPAEPEH 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01578 262 MobiDBLite consensus disorder prediction 241 262 - -
Bva08g01578 262 Pfam 14-3-3 protein 13 235 IPR023410 -
Bva08g01578 262 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Bva08g01578 262 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Bva08g01578 262 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Bva08g01578 262 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Bva08g01578 262 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Bva08g01578 262 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Bva08g01578 262 PANTHER BNAC03G57490D PROTEIN 3 258 - -
Bva08g01578 262 Coils Coil 195 215 - -
Bva08g01578 262 Gene3D - 1 248 IPR036815 -
Bva08g01578 262 SMART 1433_4 7 248 IPR023410 -
Bva08g01578 262 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Bva08g01578 262 PIRSF 14-3-3 1 251 IPR000308 -
Bva08g01578 262 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Bva08g01578 262 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Bva08g01578 262 MobiDBLite consensus disorder prediction 236 262 - -
Bva08g01578 262 PANTHER 14-3-3 PROTEIN 3 258 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01578 Bva-Chr8 8298315 8301196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01578 3 259 14-3-3 family AT1G26480 87.645 1.11e-170 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01578 - K06630 jre:108989386 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01578 08 8298315 8301196 Bva08g01578 08 8298315 8301196 ECH