Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01568 ATGAGAAAATGGGCCAGGAAGCTGTTCAGCCCAGTAGCCTGGAATTCTAGATGGCATCTGGGCCTAGCTTGGAGATCAAATTTAACTTCTTCCCCTGTCTTCCTCCTTGTTTCTCCTTATTTCAGGTTTCCACATAATCTCCACACGTCTGGTTGTCCTTCAAAGGCTTTCTCAAGAGAAAGACATAAAACGACAATGTTCGGGTTCAGGAAACCACCAGCCAAGCCTCCTGATGCAGAGAATGAATCAAATAAAACGACAACTGCTAGAAGAACAACTTCAGAACCTACACTCATCACACCGGAGGACGATGATGACTATAAAAACGGTTTCAAGGACTCAGGAGGGCTACAGAATCAGAGTGTCGAAGAGCTGGAGAAGTATGCTGTCTATAAATCTGAGGAGACAACAAAGAGCGTTAACAATTGCCTGAGGATAGCCGAGGACATCAGAGAAGATGCCTCGAGAACACTTGACATGTTGCATCAGCAGGGTGAGCAAATCAATAGGACTCACAACATGGTTGTTGAAACAGAAAAGGATTTGAGCAAGGGTGAAAAACTCCTAAACAATCTTGGGGGCATGTTCTCTATGCCCTGGAAGCCAAAGAAGACCAAGGAAATTCAAGGACCAGTAATTACACCAGACAAttcaaccaagaaaaatgcaaagaaGGAAGACAGGGAAAAATTAGGATTAGCTCCTAAAGGCAAGTCCGCTCCTGCAACGCCTCAAAATGAACCAGCAGATTGTTATCAGAAAATTGAGATGGAGAAGGCAAAGCAAGATGATGCACTTTCAGATCTCAGTGATATCTTGGGTGATTTGAAGGGTATGGCAATTGACATGGGCACTGAACTTGACAGACAAAATAAGGCTCTTGATCATCTTAGTGACGATGTGGATGGGATGAACTCTCGAGTTAAAGGTGCCAATGAACGTACACGCAAATTGCTGAAGTG 962 0.4314 MRKWARKLFSPVAWNSRWHLGLAWRSNLTSSPVFLLVSPYFRFPHNLHTSGCPSKAFSRERHKTTMFGFRKPPAKPPDAENESNKTTTARRTTSEPTLITPEDDDDYKNGFKDSGGLQNQSVEELEKYAVYKSEETTKSVNNCLRIAEDIREDASRTLDMLHQQGEQINRTHNMVVETEKDLSKGEKLLNNLGGMFSMPWKPKKTKEIQGPVITPDNSTKKNAKKEDREKLGLAPKGKSAPATPQNEPADCYQKIEMEKAKQDDALSDLSDILGDLKGMAIDMGTELDRQNKALDHLSDDVDGMNSRVKGANERTRKLLK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01568 320 MobiDBLite consensus disorder prediction 80 96 - -
Bva08g01568 320 MobiDBLite consensus disorder prediction 219 234 - -
Bva08g01568 320 Gene3D - 243 320 - -
Bva08g01568 320 Gene3D - 116 194 - -
Bva08g01568 320 CDD SNARE_Qc 259 317 - -
Bva08g01568 320 SUPERFAMILY SNARE fusion complex 120 191 - -
Bva08g01568 320 MobiDBLite consensus disorder prediction 200 247 - -
Bva08g01568 320 PANTHER SNAP25 HOMOLOGOUS PROTEIN SNAP30-RELATED 66 320 - -
Bva08g01568 320 Coils Coil 294 314 - -
Bva08g01568 320 SUPERFAMILY SNARE fusion complex 252 319 - -
Bva08g01568 320 MobiDBLite consensus disorder prediction 67 108 - -
Bva08g01568 320 CDD SNARE_SNAP25N_23N_29N_SEC9N 127 191 IPR044766 GO:0005484|GO:0031201
Bva08g01568 320 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 256 318 IPR000727 -
Bva08g01568 320 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 66 320 - -
Bva08g01568 320 SMART tSNARE_6 125 192 IPR000727 -
Bva08g01568 320 SMART tSNARE_6 251 318 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01568 Bva-Chr8 8228084 8231115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01568 246 316 SNARE and Associated Proteins AT3G09740 40.845 1.88e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01568 K18211 - gmx:100804448 375.17