Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01546 ATGGGTGGAAATGGAGAGCAACCACCACCGTCCTGGACGGCGGGGCCACCGCTGCCGCGACTCTCCATCACTCTCCCTCCACGCACTTCCACGGAGACCCTTTTCAATGGTGGGACCCCTGCTGGCGGCGCTTTTGGATTTAGCCCCGGTCCCATGACTTTACTCTCAAGCTTCTTCCCCGACAACGATGACAACAAATCCTTTTCGCAGCTTCTTGCTGGTGCTATGGTTTCTCCGGTGGCCAATTCCGTTGAAGGTGGTGGCTTTAAGCAGAGCAGGCCTTCGGGCTTGGCTACTGTGCAGTCGCCGATGTTCACGATTCCTCCTGGGTTTCTCGATTCGCCCGGGCTTTTTTCACCTGCTCAGACACCCTTTGGAATGACACACCAGCAAGCCTTGGCACAGGTCACAGCTCATGCTGTGCAGGCGCAATCAAACATGCATATGCAAGCAGAACATTCATCTTCAATACCAGCCGCAACCGCTACCTCACTGCCACAGCAGCATATGCCACCCTCAATGCCAGAATCTGGAGCAGCAATGAAGGACTCATCTGATTATTCTCCATCTGAACAAAGATCGCAGTCCTCTTCACTGAATGTCGATAAGCCTGCTGAAGATGGCTACAATTGGCGGAAGTACGGGCAGAAACAGGTTAAAGGTAGTGAATTTCCTCGGAGTTATTACAAGTGCACATATCCAAACTGTCCTGTCAAGAAAAAGGTTGAGCGCTCCCTTGATGGCCATGTAACTGCAATTATTTACAAAGGCCAGCATAATCATCAGCCTCCACAGTCCAACAAGCGCACAAAAGATGCTGTAGcttcaaatgaaaattcaagCTTGCAAGGGAATCTTGGTGCAACTTATCAAGTGCTAAGTGGAAGCTTAAATACATTGAAAGATGGAATGGCTTTCCACTCAATGGCTAAGATGGAACCGGAATCTAGCCAGGCAACAGCGGAACATCTATCAGGAAGTGACAGCGAGGAAGTTGGTGATCATGAAACTGAAGTGGATGAGAAAAATGATGAACCTGACCCCAAAAGACGAAACACTGAAGTCAGGGTTCCTGAGCCATCCTCATCACATAGGACCGTTACAGAGCCTAGAATCATAGTGCAGACGACAAGCGAGGTTGATCTCTTAGACGATGGCTATAGGTGGCGCAAATATGGTCAGAAGGTTGTCAAAGCCAACCCTTACCCAAgGAGCTACTACAAATGTACAACCCCAGGTTGCAATGTCCGGAAACACGTTGAGAGGGCTTCAACAGACCCTAAAGCTGTCATAACAACTTATGAAGGAAAACATAATCATGATGTGCCAGCCGCCAAAACCAGCAGCCACACTCTTGCCATCAGTACTGCATCGCAGATTAAATCACACAATGCTGAAACCCAGAATCACAGTTTTAGCAGCAGAGATCTTGGGAGCAATGATCATCAGCCCGTAGCACGTCTAAGGCTAAAGGAAGAGCAAATAACCTA 1490 0.4846 MGGNGEQPPPSWTAGPPLPRLSITLPPRTSTETLFNGGTPAGGAFGFSPGPMTLLSSFFPDNDDNKSFSQLLAGAMVSPVANSVEGGGFKQSRPSGLATVQSPMFTIPPGFLDSPGLFSPAQTPFGMTHQQALAQVTAHAVQAQSNMHMQAEHSSSIPAATATSLPQQHMPPSMPESGAAMKDSSDYSPSEQRSQSSSLNVDKPAEDGYNWRKYGQKQVKGSEFPRSYYKCTYPNCPVKKKVERSLDGHVTAIIYKGQHNHQPPQSNKRTKDAVASNENSSLQGNLGATYQVLSGSLNTLKDGMAFHSMAKMEPESSQATAEHLSGSDSEEVGDHETEVDEKNDEPDPKRRNTEVRVPEPSSSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKANPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHTLAISTASQIKSHNAETQNHSFSSRDLGSNDHQPVARLRLKEEQIT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01546 496 MobiDBLite consensus disorder prediction 461 496 - -
Bva08g01546 496 MobiDBLite consensus disorder prediction 258 282 - -
Bva08g01546 496 SUPERFAMILY WRKY DNA-binding domain 204 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 MobiDBLite consensus disorder prediction 1 42 - -
Bva08g01546 496 SUPERFAMILY WRKY DNA-binding domain 375 443 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 MobiDBLite consensus disorder prediction 255 282 - -
Bva08g01546 496 MobiDBLite consensus disorder prediction 342 358 - -
Bva08g01546 496 MobiDBLite consensus disorder prediction 311 367 - -
Bva08g01546 496 MobiDBLite consensus disorder prediction 461 480 - -
Bva08g01546 496 ProSiteProfiles WRKY domain profile. 378 443 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 MobiDBLite consensus disorder prediction 163 209 - -
Bva08g01546 496 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 495 IPR044810 GO:0003700
Bva08g01546 496 SMART WRKY_cls 205 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 SMART WRKY_cls 383 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 Gene3D WRKY domain 191 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 Gene3D WRKY domain 368 444 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 ProSiteProfiles WRKY domain profile. 206 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 Pfam WRKY DNA -binding domain 384 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 Pfam WRKY DNA -binding domain 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01546 496 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 16 495 - -
Bva08g01546 496 MobiDBLite consensus disorder prediction 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01546 Bva-Chr8 8134775 8137968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01546 1 496 WRKY Transcription Factor Family AT2G03340 54.792 1.53e-173 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva08g01546 WRKY 5.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01546 - - lang:109349541 645.195