Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01532 ATGGCTgctatcttttctttattttcaagcTCTCCTTTTGTTTCTCCTTGTATATCCCACAACACCCACTTCTCTTTCCTTGCCAAAGCACCACTGCTTCACCTGAAAAGGCCTCTCTTTGCTAAATCGCAGCTCGCTTCTTTGGAAACAGAAACATCACTACCACCTGCTGTTGAGACTTTCTGGCGGTGGCTCTTCGATGAAGGGATTGTCTCTTCCAAGACCCCAGTGAGGCCTGGCATGGTGCCAGAAGGTTTGGGGCTGATTGCCCAGAGAGACATTTCTCGAAACGAGGTCGTTTTGCAGGTGCCTAAGAGGTTCTGGATAAACCCAGATGCAGTGGCAGCTTCAGAAATTGGGAAAGTATGTAGTGGGTTGAAGCCATGGATATCTGTTGCTTTGTTTCTGATAAGAGAGAGGTCAAGGGATGAATCTCTATGGAAACATTACTTCAAGATTCTGCCGGAGGTTACTGATTCCACTATATATTGGTCAGAGGAGGAGCTCTTTGAGCTTCAGGGCACTCAACTTCTGAACACAACATTGAGTGTGAAAGAATATGTGAAGAGTGAATTTCTGAAagtggaagaagaaattatacTCCCTTATAAGAagcttttcccttttcctATTACATTAGATGACTTCTTCTGGGCATTTGGAATGCTGAGATCAAGGGCATTTTCTCGCCTTCCTAATGAGAATTTAGTTTTGATTCCCCTGGCTGACTTGATAAATCACAGCACCAGAGTAACCACCGAAGATAATGCTTATGAAGTCAAAGGAGGAGGCCTTTTCTCTAGGGACTACTTGTTTTCTCTAAGAAGCCCTCTTTCTGTCAAGACTGGGGAGCAGATATATATTCAATACGATTTAAACAAGACCAATGCAGAGTTGGCTTTGGACTATGGTTTCATTGAACCAACTTCGGAGCGGAATGCATTTACACTGACACTAGGGATATCTGAATCAGACCCATTTTTTGATGACAAACTAGACGTTGCTGAGAGCAATGGTTTTGGTGAGACTGCATACTTTGACATATTCGATGACAGGCCACTTCCACCAGGACTGCTTCCATATCTCCGGCTGGTGGCGTTAGGGGGCACCGATGCTTTCCTGTTGGAAGCATTATTCAGGAACACCATCTGGGATCATCTTCAATTGCCCATGAGCCGCGACAATGAGGAGCTACTATGCCGAGTGGTTCGAGAGGCCTGCAAATCTGCCCTTGCTGGTTATCATACAACCATTGAAGAGGATGAGAAGTTGAAAGGAGCAAATCTAGATCGGAGGCTTGCAATGGCAATCGGAGTAAGACAGGGGGAGAAGAAGGTGCTACAGGAACTTGACAGGTTCTTTGAAGAGAAGGAATTAGAATTGAATGAGTTAGAATATTATCAAGAAAGGAGGCTTAAGGAACTTGGTCTCTGCGGAGAAAATGGTGATATCCTTGGGGACCTCGGCAAGTTCATGTA 1478 0.4323 MAAIFSLFSSSPFVSPCISHNTHFSFLAKAPLLHLKRPLFAKSQLASLETETSLPPAVETFWRWLFDEGIVSSKTPVRPGMVPEGLGLIAQRDISRNEVVLQVPKRFWINPDAVAASEIGKVCSGLKPWISVALFLIRERSRDESLWKHYFKILPEVTDSTIYWSEEELFELQGTQLLNTTLSVKEYVKSEFLKVEEEIILPYKKLFPFPITLDDFFWAFGMLRSRAFSRLPNENLVLIPLADLINHSTRVTTEDNAYEVKGGGLFSRDYLFSLRSPLSVKTGEQIYIQYDLNKTNAELALDYGFIEPTSERNAFTLTLGISESDPFFDDKLDVAESNGFGETAYFDIFDDRPLPPGLLPYLRLVALGGTDAFLLEALFRNTIWDHLQLPMSRDNEELLCRVVREACKSALAGYHTTIEEDEKLKGANLDRRLAMAIGVRQGEKKVLQELDRFFEEKELELNELEYYQERRLKELGLCGENGDILGDLGKFM 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01532 492 Gene3D set domain protein methyltransferase, domain 1 55 306 - -
Bva08g01532 492 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 37 483 - -
Bva08g01532 492 ProSiteProfiles SET domain profile. 68 291 IPR001214 GO:0005515
Bva08g01532 492 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 1 490 IPR011192 GO:0009507|GO:0030785
Bva08g01532 492 Pfam Rubisco LSMT substrate-binding 323 447 IPR015353 -
Bva08g01532 492 PIRSF RMT_SET 1 491 IPR011192 GO:0009507|GO:0030785
Bva08g01532 492 Pfam SET domain 85 290 IPR001214 GO:0005515
Bva08g01532 492 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 37 483 - -
Bva08g01532 492 SUPERFAMILY SET domain 55 311 IPR046341 -
Bva08g01532 492 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 315 485 IPR036464 -
Bva08g01532 492 Gene3D - 307 471 IPR036464 -
Bva08g01532 492 CDD SET_RBCMT 69 306 IPR044431 GO:0016279|GO:0018022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01532 Bva-Chr8 8064505 8066858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01532 61 249 NAC Transcription Factor Family AT3G56570 28.141 4.16e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva08g01532 SET 9.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01532 K00592 - gmx:100818113 735.332