Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01523 ATGTCTGTTGCCTCAGAAGAACAGATCTGGCTTCAACGATGTGGGAAGAGTTGCAGACTAAGGTGGATTAACTACCTTAGACCCGATATTAAAAGAGGAACTTTCAGCTTGCAGGAAGAGCAGACCATTATTCTTCTCCATGCTCTTCTTGGAAACAAATGGTCAGCCATAGCAGCTCAGCTGCCTATGAGAACGGATAACGAGATCAAAAACTACTGGAACACCCACTTGAAGAAAAGACTGCTCAAAATGGGCATAGACCCCTCCACACACAAGCCAAAAACCGCAACCAGGTATGAATATCTGAGCCACATTACTCAGTGGGAGAGCGTCAGGCTCCAAGCTGAAGCCAGACTAGTTAGAGAATCAAAAATGGTGGGCACGGGACAGGACGAGAACGAAAATCAGAACCAGGTGGGAGGATCCCAGACAGCTAGGCTAGTGGTCACCAAAATCCCAGTTGAACATCGCCCACCATGCCTAGATGTACTCAAAGCATGGCAAAATCCATACCCAAGTTCAACTAATCATAATACAAAAATGCATGACATGTATGCCATCACGCTCACCTCCACCTCGAACCTCCCTCCAACGATGTCGTCAGAGGGTGTTGACACGAAGAAAACTACACAGACAGAAGtcggagagaaaagaaaagtggagCGTGAGAAGGACATgacggtggcggccgccgtgGAAGCATTTGGAGGAGCATTACCATCGCCACCTTATGAGAATGGTGTAGACCCATTCGTACTCTCCAACACTATGACTATGACGCAGCTGGTTTATAATTCAATAGAACAGAACCAGGAAATGGATGGGGATGGAAACTTAAGTCGCTTGGGCTTTGAGGAGATAAACACCATTCTTGATACTGTGCCCTACAACGTTAATTTGTATTTACCCTA 911 0.4369 MSVASEEQIWLQRCGKSCRLRWINYLRPDIKRGTFSLQEEQTIILLHALLGNKWSAIAAQLPMRTDNEIKNYWNTHLKKRLLKMGIDPSTHKPKTATRYEYLSHITQWESVRLQAEARLVRESKMVGTGQDENENQNQVGGSQTARLVVTKIPVEHRPPCLDVLKAWQNPYPSSTNHNTKMHDMYAITLTSTSNLPPTMSSEGVDTKKTTQTEVGEKRKVEREKDMTVAAAVEAFGGALPSPPYENGVDPFVLSNTMTMTQLVYNSIEQNQEMDGDGNLSRLGFEEINTILDTVPYNVNLYLP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01523 303 MobiDBLite consensus disorder prediction 193 208 - -
Bva08g01523 303 PANTHER TRANSCRIPTION FACTOR MYB106 11 207 - -
Bva08g01523 303 SMART sant 31 79 IPR001005 -
Bva08g01523 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 81 IPR017930 -
Bva08g01523 303 SUPERFAMILY Homeodomain-like 12 86 IPR009057 -
Bva08g01523 303 Gene3D - 2 31 - -
Bva08g01523 303 MobiDBLite consensus disorder prediction 193 222 - -
Bva08g01523 303 ProSiteProfiles Myb-like domain profile. 27 77 IPR001005 -
Bva08g01523 303 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 11 207 - -
Bva08g01523 303 CDD SANT 34 77 IPR001005 -
Bva08g01523 303 Gene3D - 34 102 - -
Bva08g01523 303 Pfam Myb-like DNA-binding domain 32 77 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01523 Bva-Chr8 8020461 8023050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01523 7 126 MYB Transcription Factor Family AT5G15310 72.093 1.76e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva08g01523 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01523 K09422 - gmx:100799222 237.269