Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01521 ATGGAGGCAAGAACAAGCTCTGAACTGCCCCCTGGCTTTAGGTTCCACCCAACTGATGAGGAGCTAATTGTTCATTACCTTTGTAACCAAAAAACCTCAAAGCCATGCCCTGCATCAATCATCCCAGAAGTTGATATCTATAAATTTGATCCTTGGCAACTACCTGATAAAGCAGGGTTTGGAGAAAAGGAATGGTACTTTTTCACCCCAAGAGACAGAAAATACCCCAATGGGGTGAGGCCTAATAGAGCCACTGTTTCTGGGTACTGGAAAGCCACAGGCACAGACAAGGCAATCTATAGTGGGTCCAAGCATATTGGGGTGAAGAAAGCTTTGGTATTTTACAAGGGCAAGCCACCAAAGGGTATCAAGACAGATTGGATTATGCATGAGTATAGACTTGTTGAATCAAGAAGACAAGTCCACAAGCAAATTGGGTCCATGAGGTTGGATGACTGGGTTCTGTGCCGGATCTACAAGAAGAAGCACATAGCAAAAGCATTTGAGCAAAAAGTGGATGACCCAATTGCCCAAATTAACATAACTGCAGCTAGTGATGAAACTGCACAACAAATGATGAAACTTCCAAGGGCTTGTTCCCTTACCCATCTGCTGGACATGGATTACTTTGGTTCAATTTCACAGATATTAGCTGAAGGCACCTATAACTCATCACCCTTTGATTTTCCCATTAACATGGCCAATGTTGGAATAGACCCATTTGTAAAATCTCATATGGGTGATAACATGCCAACCAATTATGCAGCAGATTCTGGGAAGTTCCAAGTGAAACAGAATAGCACTGTCAACGAGCCAATATTCATGAACCATGTGTATGATTCACGCCAATA 851 0.4266 MEARTSSELPPGFRFHPTDEELIVHYLCNQKTSKPCPASIIPEVDIYKFDPWQLPDKAGFGEKEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGVKKALVFYKGKPPKGIKTDWIMHEYRLVESRRQVHKQIGSMRLDDWVLCRIYKKKHIAKAFEQKVDDPIAQINITAASDETAQQMMKLPRACSLTHLLDMDYFGSISQILAEGTYNSSPFDFPINMANVGIDPFVKSHMGDNMPTNYAADSGKFQVKQNSTVNEPIFMNHVYDSRQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01521 283 PANTHER NAC TRANSCRIPTION FACTOR 56 3 240 - -
Bva08g01521 283 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Bva08g01521 283 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Bva08g01521 283 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 3 240 - -
Bva08g01521 283 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Bva08g01521 283 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01521 Bva-Chr8 8002890 8004263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01521 1 216 NAC Transcription Factor Family AT1G69490 66.228 6.48e-111 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva08g01521 NAM 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01521 - - gmx:732552 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01521 08 8002890 8004263 Bva08g01521 08 8002890 8004263 ECH