Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01512 ATGAGCTTCTATGCTTCTTGTAAAACCACTTTTGCCCTTGGCGGTTTTTGGTCCCAACAGTTAAAGCGTTTAGTTAGTTGTGACTCTGACCCTCTCCCCCCCCTTCCCCTCAccccctcccctcccctctaTAAATTCACTTCATTTCCTCCCATTTTTCTTCACTCATCTCTCCTGCATTGCCATTTGTCCAACGACCGTTCCCTCTTTGGCACTTCAACATCAAAGAAAATGGCTCTCATTGGGTTGCTCTTGGTGGGTCTTGCTTCAATGTTCTCCTCTGCCTATGGCTACGGTGGAGGATGGATCAATGCTCATGCTACCTTCTATGGAGGAAGTGATGCTTCTGGGACAATGGGTGGGGCTTGTGGATATGGGAACCTCTACAGCCAAGGTTATGGAACAAACACTGCAGCTCTGAGCGCTGCTCTGTTCAACAGCGGTTTAAGCTGTGGATCTTGCTATGAGATTAGGTGCGTGAATGACCGTAAATGGTGCCTGCCTGGCTCCATTATGGTCACAGCCACCAATTTCTGCCCACCAAACAATGCCTTGCCCAACAATGCAGGGGGCTGGTGTAACCCTCCCCAGCACCATTTTGATCTGGCTCAACCTGTTTTCCTGCGCATTGCTCAATACAGAGCTGGAATAGTCCCTGTTGCCTACCGAAGGGTGCCCTGCAGAAGAAGGGGAGGAATCAGGTTCACCGTCAATGGCCATTCCTACTTCAACTTGGTCCTCGTCACCAACGTTGGCGGTGCCGGTGATGTGCACAGTGTGGCCATCAAAGGTTCAAGAACTGGTTGGATGCCAATGTCAAGAAACTGGGGCCAGAACTGGCAGAGCAACAACTACCTCAACGGGCAAAGCCTGTCCTTCAAGGTCACCACCAGCGATGGCCGTTCTGTTGTGTCTTATAACGTTGCCCCTGCTGGCTGGTCCTTTGGCCAAACCTACACTGGCGCCCAATTCCGCTG 977 0.5015 MSFYASCKTTFALGGFWSQQLKRLVSCDSDPLPPLPLTPSPPLYKFTSFPPIFLHSSLLHCHLSNDRSLFGTSTSKKMALIGLLLVGLASMFSSAYGYGGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSAALFNSGLSCGSCYEIRCVNDRKWCLPGSIMVTATNFCPPNNALPNNAGGWCNPPQHHFDLAQPVFLRIAQYRAGIVPVAYRRVPCRRRGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVAIKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRSVVSYNVAPAGWSFGQTYTGAQFR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01512 325 Gene3D - 87 228 IPR036908 -
Bva08g01512 325 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 242 321 IPR007117 -
Bva08g01512 325 PANTHER EXPANSIN-A15 82 324 IPR002963 GO:0009664
Bva08g01512 325 Gene3D - 232 324 IPR036749 -
Bva08g01512 325 Pfam Expansin C-terminal domain 233 310 IPR007117 -
Bva08g01512 325 SUPERFAMILY Barwin-like endoglucanases 101 250 IPR036908 -
Bva08g01512 325 PRINTS Expansin/Lol pI family signature 101 116 IPR007118 GO:0005576
Bva08g01512 325 PRINTS Expansin/Lol pI family signature 215 231 IPR007118 GO:0005576
Bva08g01512 325 PRINTS Expansin/Lol pI family signature 307 321 IPR007118 GO:0005576
Bva08g01512 325 PRINTS Expansin/Lol pI family signature 269 283 IPR007118 GO:0005576
Bva08g01512 325 PRINTS Expansin/Lol pI family signature 119 137 IPR007118 GO:0005576
Bva08g01512 325 PRINTS Expansin/Lol pI family signature 141 159 IPR007118 GO:0005576
Bva08g01512 325 PRINTS Expansin signature 207 220 IPR002963 GO:0009664
Bva08g01512 325 PRINTS Expansin signature 159 170 IPR002963 GO:0009664
Bva08g01512 325 PRINTS Expansin signature 190 207 IPR002963 GO:0009664
Bva08g01512 325 PRINTS Expansin signature 132 146 IPR002963 GO:0009664
Bva08g01512 325 PRINTS Expansin signature 231 243 IPR002963 GO:0009664
Bva08g01512 325 PRINTS Expansin signature 278 299 IPR002963 GO:0009664
Bva08g01512 325 PRINTS Expansin signature 307 323 IPR002963 GO:0009664
Bva08g01512 325 PRINTS Expansin signature 243 264 IPR002963 GO:0009664
Bva08g01512 325 PRINTS Expansin signature 171 181 IPR002963 GO:0009664
Bva08g01512 325 SMART dpbb_1 137 222 IPR007112 -
Bva08g01512 325 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 120 232 IPR007112 -
Bva08g01512 325 Pfam Lytic transglycolase 137 222 IPR009009 -
Bva08g01512 325 SUPERFAMILY PHL pollen allergen 229 321 IPR036749 -
Bva08g01512 325 PANTHER EXPANSIN 82 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01512 Bva-Chr8 7960662 7962763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01512 77 325 Expansin Gene Family AT2G03090 81.124 6.25e-154 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01512 - - gmx:100796316 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01512 08 7960662 7962763 Bva08g01512 08 7960662 7962763 ECH
Bva08g01512 08 7960662 7962763 Bva06g01209 06 9410780 9411787 ECH
Bva08g01512 08 7960662 7962763 Bva05g00492 05 2409645 2411261 ECH
Bva08g01512 08 7960662 7962763 Bva03g02129 03 18757072 18760547 ECH