Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01506 ATGTCGGAGGTTAAAGACCCGGCGATAAAGCTGTTTGGGAGGACGATTTCGTTGCCATTCAACCGCCAAAATTCTGCCAATGACTCTTCTCTCCCTGCTTCTGAAGATTGCTCTCACCATAGCCCTCCTTCATCTTTGTCTTCTCCTCGCGAAGGCAGCTCTGGATTCAGAGAACCCCAAGAACATGGGAATAAGgAGCTATCACCAAGAAGAGAACTCACCTCAGCTGAAGAGGATGATGCCTCACATCAAACTAGAGAGGACTTAAAGTCTACCACAACATCTTCAGGCATTGAGAGCCCTAACACTTGCTCACCTGAAAGAGAGGCATCTCTACTGAAATCCTCCAAAAATGGAGAGCAGAGTGAGACAAGTATTTCGGAAGAAAAGACTGTCAAGAAGCCTGATAAAATCCTTCCGTGCCCACGATGCAATAGCATGGacaccaaattttgttattacaACAATTACAACGTTAATCAGCCCCGCCACTTCTGCAAGAACTGTCAGAGATACTGGACTGCCGGAGGAACCATGAGAAATGTGCCTGTAGGTGCTGGTCGACGCAAGAGCAAGAGCTCTTCTGCCTCTCATTATCATCACATAATGGTTCCAGAGGCCCTTCAGACACCAAAAgccaatgctgccaatggaTTCCATGCTGTTTTGGGAAATAGAGCAGCTCTTTTGACCTTTGGCACAGATTCTCCTCTTTGTGAATCCATGGCTTCTGTCTTGAACCTTGGAGAGAAAGCTCAAAATGGTGTTTTGAATGGATTTCTTGTGCCTGATCAACAAAATGTCTTTGTTCCTTATAGCAGAGAAGATAATAGAGAAGGTCACTCAGTTGGAGCTTCTGCTTCTGTCACAACTTCAAATTCATCAGAGAAGAAAGCAAGTGCTGGCTTGCAAGAATCAGGGGACAAAAGCTATCAAGGTTTCCCTCCTCAATTGCCATGTTTCCCCGGTTCCCCGTGGCCTTATCCATGGAGCTCGGCGCAATGGAACTCTCCAGTGCCTCCACCCGCATTCTGCCCACCAGGCTATCCAGTGTCATTCTATCCCTCACCTGCATATTGGGGTTGCACTCTACCCACCTCATGGAATATGCCATGTTTGTCTCCACAATCTTCTCTGAGCCACTCTTCCCCTGGCTCTGGCCCTAATTCACCCACCTTGGGAAAACACTCAAGGGATGGGAACATCCTTAGTCCATCCAACTCACAGAAAGACAAGCCCGATAAAGATAGCAACAACAATTCAGAAAACAATGTCCTGATCCCCAAGACACTTCGAATCGATGATCCTAGTGAAGCTGCAAAGAGCTCCATATGGTCAACACTAGGGATCAAGAATGAAAAGGGCAATTCTCTCAACGGAGGAGGCCTTTTCAGGATATTTCTATCCAAGGGAGATGACAAGAATCATATGGTTGAAGCATCGCCGGTGTTGCAAGCCAACCCGGCAGCTCTGTCGCGGTCTGTGACCTTCCACGAGAGGACCTA 1505 0.4625 MSEVKDPAIKLFGRTISLPFNRQNSANDSSLPASEDCSHHSPPSSLSSPREGSSGFREPQEHGNKELSPRRELTSAEEDDASHQTREDLKSTTTSSGIESPNTCSPEREASLLKSSKNGEQSETSISEEKTVKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSSSASHYHHIMVPEALQTPKANAANGFHAVLGNRAALLTFGTDSPLCESMASVLNLGEKAQNGVLNGFLVPDQQNVFVPYSREDNREGHSVGASASVTTSNSSEKKASAGLQESGDKSYQGFPPQLPCFPGSPWPYPWSSAQWNSPVPPPAFCPPGYPVSFYPSPAYWGCTLPTSWNMPCLSPQSSLSHSSPGSGPNSPTLGKHSRDGNILSPSNSQKDKPDKDSNNNSENNVLIPKTLRIDDPSEAAKSSIWSTLGIKNEKGNSLNGGGLFRIFLSKGDDKNHMVEASPVLQANPAALSRSVTFHERT 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01506 501 MobiDBLite consensus disorder prediction 374 432 - -
Bva08g01506 501 ProSiteProfiles Zinc finger Dof-type profile. 139 193 IPR003851 GO:0003677|GO:0006355
Bva08g01506 501 MobiDBLite consensus disorder prediction 374 408 - -
Bva08g01506 501 MobiDBLite consensus disorder prediction 17 54 - -
Bva08g01506 501 MobiDBLite consensus disorder prediction 88 122 - -
Bva08g01506 501 MobiDBLite consensus disorder prediction 13 131 - -
Bva08g01506 501 MobiDBLite consensus disorder prediction 283 311 - -
Bva08g01506 501 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 501 - -
Bva08g01506 501 MobiDBLite consensus disorder prediction 276 314 - -
Bva08g01506 501 MobiDBLite consensus disorder prediction 55 87 - -
Bva08g01506 501 PANTHER CYCLIC DOF FACTOR 2 1 501 IPR045174 GO:0003700|GO:0006355
Bva08g01506 501 ProSitePatterns Zinc finger Dof-type signature. 141 177 IPR003851 GO:0003677|GO:0006355
Bva08g01506 501 Pfam Dof domain, zinc finger 136 193 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01506 Bva-Chr8 7922520 7926223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01506 4 499 C2C2-Dof Transcription Factor Family AT5G39660 40.987 5.74e-101 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva08g01506 zf-Dof 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01506 - - zju:107429011 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01506 08 7922520 7926223 Bva11g00975 11 11629494 11632861 BWGD
Bva08g01506 08 7922520 7926223 Bva08g01506 08 7922520 7926223 ECH
Bva08g01506 08 7922520 7926223 Bva06g01214 06 9425941 9428870 ECH
Bva08g01506 08 7922520 7926223 Bva05g00489 05 2393992 2396820 ECH
Bva08g01506 08 7922520 7926223 Bva04g00288 04 1751664 1755116 ECH