Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01487 ATGGATGAGAGAAATGATACTGAGAAACTTGACGAAGTTGTGCTACCAGGGTTTAGGTTTCATCCAACCGATGAGGAGCTTGTTGGGTTTTATCTTAGGAGAAAGATTCAGCAGAGGCCTCTGACGATTGAGCTCATCAAGCAGCTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGTTGGCCACTACAGGAGAGAAAGAATGGTATTTTTATTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACAGGAGCTGGGTTCTGGAAAGCCACAGGAACTGATAGGCCTATTTACTCTTCTGAGGGTTCAAAGTGCATTGGATTGAAGAAATCCCTTGTTTTCTACAAAGGCAGAGCTGCCAAAGGAATCAAAACTGATTGGATGATGCATGAGTTCCGCTTGCCTTCTCTCATAGACTCATCTTCACCAAAGAAGTACATAGACAAGACCATTCCAGCTAACGATTCATGGGCCATATGCAGGatattcaagaaaattaattctacAGCTCAAAGAGCTCTTTCCCACTATTGGGTCTCTCCTTTGGCAAAAACAAACACTTCTGATTTGCTAACCAAAGATGAATATAGTCCTCAGTGTTGTTCAGAGCCATTGACAAAGAAAACTGGCTTAATCGGCCAGTTTCATGCTAATCACAGTGACATACAACACTTAAACTCTAGTAATAGCTCTCTTTTTGGCTCAGATATTGGTTCTTACAAACCCTTATTCAATAATCAATTGCTTTATAAACCCTTTGATCAATTGCCCATTTCAAATGGGGAACCTACCACTAGCTTGATGTTTTCATCTCCCCTTGAAACTTGTTCTTCCGCAGCCAAATCCTCAGTGGAGTATTCTTCCATGCTGTTGAATATGCCATCTTCTGTGCTAGGAGATTTTGGTAAGGTTTCTGAGGGCATGAACTTTGGTGGGTTTCAAGAGAATGGTCATAATGGTAATTATCCTATGGCTTTATTACGTGAGATGCAAGGGACACTTGGCAATGTAGATGACAATGCAATGGTGAAGATTCCCAATATGAATGTGGCTCGTGGAGTCGAGCAAGAGTTGGAGACAGTTCGATCTATTGGGTTTCCATTCAGTTTGCCTTTGAATATTAATGGGGAAGCATGGAAGTCAAATCTACTTTGGGACGATGTGCCATCAAATTACTCCACAACCAAGTGCTATACTTA 1220 0.4074 MDERNDTEKLDEVVLPGFRFHPTDEELVGFYLRRKIQQRPLTIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLIDSSSPKKYIDKTIPANDSWAICRIFKKINSTAQRALSHYWVSPLAKTNTSDLLTKDEYSPQCCSEPLTKKTGLIGQFHANHSDIQHLNSSNSSLFGSDIGSYKPLFNNQLLYKPFDQLPISNGEPTTSLMFSSPLETCSSAAKSSVEYSSMLLNMPSSVLGDFGKVSEGMNFGGFQENGHNGNYPMALLREMQGTLGNVDDNAMVKIPNMNVARGVEQELETVRSIGFPFSLPLNINGEAWKSNLLWDDVPSNYSTTKCYT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01487 406 Gene3D NAC domain 23 176 IPR036093 GO:0003677|GO:0006355
Bva08g01487 406 SUPERFAMILY NAC domain 13 172 IPR036093 GO:0003677|GO:0006355
Bva08g01487 406 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Bva08g01487 406 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 400 - -
Bva08g01487 406 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Bva08g01487 406 PANTHER PROTEIN FEZ ISOFORM X1 1 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01487 Bva-Chr8 7829567 7831029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01487 1 238 NAC Transcription Factor Family AT1G26870 63.786 4.45e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva08g01487 NAM 7.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01487 - - vun:114179488 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01487 08 7829567 7831029 Bva08g01487 08 7829567 7831029 ECH