Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01480 ATGCAAAACCCAGTCTACAACAGCCATGTAAAGCTCCTTGCTTTTGATCTTCTCTCCCTCACCCAAACcccttctccttcttcctctGCCTCGAACCCAGTTATCTCTTTCTCCCTCAGAGGCATACCCATCTCTCGCGCAGAAACTCTGGGTACCGTTACCTACCGAGAATACAAACCCTGCAAATTCCTCAAGTTCTCCATCGACGATGGCACTGGTCTTGTCAACTGCATCCTGTGGCTCAACCAGCTAACCTCTGCATACTTCGCCCGCCGTCGAAGCCCACCAGATGTTCGATTAATTGCTGAGTCCGCAGCCCACTTTGCCGATCTCATTAAGCTTGGCGTGGTGGCTAGAGTAAGGGGAAAACTCACCAACTATAGGGGTACGGTGCAGATTACAGTCTCTGATGTTTTCATTGAGAGGGATCCCAATGCAGAGATCTTGCATTGGTTGGATTGCATCAATTTGGCGAGCAAATGTTATGATGTTTTGCCTTTAGCGCGCCAACAGAGGAATCAGAAAAGTGATACTTGTACATCGACTTCTGGATTATCAAATAGTTA 566 0.4611 MQNPVYNSHVKLLAFDLLSLTQTPSPSSSASNPVISFSLRGIPISRAETLGTVTYREYKPCKFLKFSIDDGTGLVNCILWLNQLTSAYFARRRSPPDVRLIAESAAHFADLIKLGVVARVRGKLTNYRGTVQITVSDVFIERDPNAEILHWLDCINLASKCYDVLPLARQQRNQKSDTCTSTSGLSNS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01480 188 PANTHER REPLICATION PROTEIN A-RELATED 6 170 IPR040260 -
Bva08g01480 188 PANTHER CST COMPLEX SUBUNIT STN1 6 170 - -
Bva08g01480 188 Gene3D - 3 165 IPR012340 -
Bva08g01480 188 Pfam OB-fold nucleic acid binding domain 53 139 IPR004365 GO:0003676
Bva08g01480 188 SUPERFAMILY Nucleic acid-binding proteins 37 157 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01480 18 155 Core DNA Replication Machinery Family AT3G02920 24.638 5.18e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01480 K23312 - vvi:100852748 213.001