Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01460 ATGCAGAAGCAGCTGGGAAATGAAGAATCCAAGAAGAAGGAGCGCCACATTGTGACGTGGACTCAAGAGGAGGATGATATACTTAGAGAACAGATTGGCATCCATGGAACTGAAAATTGGTCAATTATTGCATCCAAGTTCAAGGATAAGACGACAAGACAGTGCCGAAGAAGATGGTACACGTACTTGAATTCTGATTTCAAGAAAGGCGGATGGTCACCGGAGGAAGACATGCTCTTATGTGAGGctcaaaagatatttggtaACAGATGGACAGAAATAGCAAAGGTGGTTTCAGGAAGAACGGATAACGCTGTAAAAAATCGGTTCTCCACACTGTGCAAAAAGAGAGCAAAATATGAAGCCTTGGCAAAAGAGAACAACACTACATATATCAATTCCAGTAACAAAAGGATCATATTCCAACATGGTTATAGTACAGATGCAACATCAGAGGCAGCaccaatgaagagaatgaGGAGGGCCCATATCTCTGCTTCTGCAGCAAAGATCAACTTCGGAGACAGATCTCATAAGCAATGTGGAACAACAACAAATCAGCAGCCAAGGGCACCGTTTGCAGTATTAGCTCAAAACTTTCATAAAGTCAACAACTTGCAAGATCAGCATCATGTCTGCAATGCCAAGTTCACCATTGATGACCAGAATAACAAGATTCAAGGAACGTTCCTGAAAAAGGATGATCCAAAGATGAGCGCATTGATGCAACAAGCAGAATTACTAAGTTCATTAGCTCTAAAAGTTAATACTGAGAACGTGGACCAGAGTCTTGAGAATGCATGGAAGGTTCTCCAAGAGTTTCTGAACAGAAACAAAGAATcagatattttcaaatataagattCCAGATTTACAGATCGTAGATCTTAAAGATATGGTGGAGGACCTAAAGAGTAGTAATGAGGGAAGCCAACCATGTTggagGCAATCAGAACTATATGAGGACTCTCCAGGCAGTTCTGAATACAGTACAGGATCGACTCTCCTGTCCCAATCAGTTGGTGATAATTCAGAACAGTCACTGCATCAGGATGTTGAAACTGAAATGAAGTCTATTCAAATTGGAGATCAAAAAGGAGTTAGTGAATGCGAGAAAGGGGTTCTTTCTGCTGAAACTGTGAATCAAGATATCTTCCCATTCTGTGAGGAACAGATAAACAATGATGGCTTTGTTTCTGCCTCATCAAGTACAGGGTTCAATTCCCCTCTTCAAGTTACCCCTCTATTCAGGTCCTTGGCTGCTGGAATTCCCAGTCCACAGTTCTCAGAAAGCGAAAGGAATTTCCTAATGAAAACACTCGGAATAGAATCCCCATCCCCAAACCCAAACCCAAGTGCCAATCCTTCACAACCACCATCCTGCAAAAGAGCCCTACTGCATAGTCTATA 1409 0.4045 MQKQLGNEESKKKERHIVTWTQEEDDILREQIGIHGTENWSIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTTYINSSNKRIIFQHGYSTDATSEAAPMKRMRRAHISASAAKINFGDRSHKQCGTTTNQQPRAPFAVLAQNFHKVNNLQDQHHVCNAKFTIDDQNNKIQGTFLKKDDPKMSALMQQAELLSSLALKVNTENVDQSLENAWKVLQEFLNRNKESDIFKYKIPDLQIVDLKDMVEDLKSSNEGSQPCWRQSELYEDSPGSSEYSTGSTLLSQSVGDNSEQSLHQDVETEMKSIQIGDQKGVSECEKGVLSAETVNQDIFPFCEEQINNDGFVSASSSTGFNSPLQVTPLFRSLAAGIPSPQFSESERNFLMKTLGIESPSPNPNPSANPSQPPSCKRALLHSL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01460 469 ProSiteProfiles Myb-like domain profile. 20 63 IPR001005 -
Bva08g01460 469 SMART sant 16 65 IPR001005 -
Bva08g01460 469 SMART sant 68 116 IPR001005 -
Bva08g01460 469 CDD SANT 72 113 IPR001005 -
Bva08g01460 469 Pfam Myb-like DNA-binding domain 20 80 - -
Bva08g01460 469 Gene3D - 8 68 - -
Bva08g01460 469 Gene3D - 71 140 - -
Bva08g01460 469 PANTHER MYB PROTEIN-RELATED 8 466 - -
Bva08g01460 469 SUPERFAMILY Homeodomain-like 16 110 IPR009057 -
Bva08g01460 469 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bva08g01460 469 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Bva08g01460 469 PANTHER TRANSCRIPTION FACTOR MYB88 8 466 - -
Bva08g01460 469 MobiDBLite consensus disorder prediction 440 469 - -
Bva08g01460 469 CDD SANT 19 63 IPR001005 -
Bva08g01460 469 MobiDBLite consensus disorder prediction 305 346 - -
Bva08g01460 469 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 67 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01460 Bva-Chr8 7654089 7660228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01460 58 469 MYB Transcription Factor Family AT1G14350 54.567 6.01e-144 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva08g01460 Myb_DNA-bind_6 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01460 K09422 - gmx:100807667 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01460 08 7654089 7660228 Bva08g01460 08 7654089 7660228 ECH