Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01457 ATGGGGAACTGCTTGGATTCTTCTGCTAAAGTAGATGCAGCTCAAAGTTCCAAAACTTGTGCATCTGGAATATCGAAAACTACTCCTTCGAGCTTATCTATTCCCTCACACAGTGAAAAAAGCAATCCCTCGAGTCTTCCCACACCAAGAACTGAGGGTGAAATCTTgtcttcttcaaatttaaaatcctTCACATTCAATGAGCTAAAGAATGCCACCAGAAATTTCCGGCCTGACAGTCTCCTTGGAGAAGGGGGATTTGGTTATGTTTATAAGGGATGGATTGATGAACACACGTACACAGCTTCAAAGCCCGGATCTGGAATGGTTGTGGCTGTAAAGAAGCTTAAGCCTGAGAGTTTTCAAGGTCATAAGGAGTGGTTGACTGAAGTTAACTACCTGGGGCAACTCCACCATCGTAATCTGGTTAAATTGATTGGGTTCTGCTTGGAGGGAGAGAATCAGCTATTGGTCTATGAGTTTATGCCCAAGGGGAGCTTGGAGAATCATCTCTTTAGAAGAGGACCTCAGCCACTGTCTTGGTCAGTGAGGATGAAAGTGGCCATTGGTGCTGCCAAAGGACTTGCTTTTCTTCATAATGCCCAATCGCAAGTCATATACCGTGATTTTAAAGCTTCTAATATTCTACTAGATGCTGAGTTCAATGCTAAACTCTCTGATTTTGGCTTAGCCAAGGAAGGTCCCACTGGTGATAGAACTCACGTTTCTACTCAAGTCATGGGTACTCACGGATATGCCGCACCTGAATACGTTGCAACAGGTCGGTTGACAGCCAAAAGTGATGTGTACAGCTTCGGAGTTGTGTTGCTTGAGCTGTTGTCTGGAAGACGTGCTGTTGATAAATCAAAAACTGGTATAGAACAGAATCTGGTAGACTGGGCAAAACCATATTTGGGTGATAAACGAAGACTGTTTCGCATTATGGACACCAAGTTGGAGGGTCAATACCCACAGAAAGGAGCTTATTCAGCTGCCACTGTCGCTCTACAATGCCTAAATAATGAAGCCAAGGCAAGACCTACTATGACAGAAGTTTTAGCAACACTTGAGCAGATTGAGGCCCCCAACAAGTCTCAAACAGAGCTGCGTAGACCCCAAGTTCCTATTACCAAGTCTCCTGCACGAAATAAGAGCCCTCTGAATATGACTCCAACTGCATCCCCGTTGCCATCTTACCGCCAATCTCCTCGTGTGCGTTG 1220 0.4434 MGNCLDSSAKVDAAQSSKTCASGISKTTPSSLSIPSHSEKSNPSSLPTPRTEGEILSSSNLKSFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTYTASKPGSGMVVAVKKLKPESFQGHKEWLTEVNYLGQLHHRNLVKLIGFCLEGENQLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAAKGLAFLHNAQSQVIYRDFKASNILLDAEFNAKLSDFGLAKEGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKTGIEQNLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKGAYSAATVALQCLNNEAKARPTMTEVLATLEQIEAPNKSQTELRRPQVPITKSPARNKSPLNMTPTASPLPSYRQSPRVR 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01457 406 MobiDBLite consensus disorder prediction 9 54 - -
Bva08g01457 406 MobiDBLite consensus disorder prediction 363 406 - -
Bva08g01457 406 CDD STKc_IRAK 82 359 - -
Bva08g01457 406 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 19 404 - -
Bva08g01457 406 Pfam Protein tyrosine and serine/threonine kinase 80 355 IPR001245 GO:0004672|GO:0006468
Bva08g01457 406 ProSitePatterns Protein kinases ATP-binding region signature. 82 115 IPR017441 GO:0005524
Bva08g01457 406 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Bva08g01457 406 Gene3D Transferase(Phosphotransferase) domain 1 162 379 - -
Bva08g01457 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bva08g01457 406 PANTHER OS01G0588500 PROTEIN-RELATED 19 404 - -
Bva08g01457 406 ProSiteProfiles Protein kinase domain profile. 76 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01457 406 MobiDBLite consensus disorder prediction 1 54 - -
Bva08g01457 406 SUPERFAMILY Protein kinase-like (PK-like) 44 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01457 Bva-Chr8 7643106 7646247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01457 54 356 Glycoside Hydrolase AT3G07070 52.941 1.36e-112 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva08g01457 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01457 - - gmx:100809778 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01457 08 7643106 7646247 Bva11g01021 11 11862351 11865078 BWGD
Bva08g01457 08 7643106 7646247 Bva08g01457 08 7643106 7646247 ECH
Bva08g01457 08 7643106 7646247 Bva03g01291 03 12587394 12592641 ECH
Bva08g01457 08 7643106 7646247 Bva04g01205 04 8260389 8266771 ECH