Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01450 ATGGAAACGAAAGAGGCTGAAGAGATAGGTCACAATAAgTCTGTGCAAATGCATTTCTTTGACATCCTTCAACAAGATCAGAAACAAGAAGAGGCGCCAAGCAAAGCTAAAGGTACTGCAactgatgatgaagaaaacaCCGAAGAAAGTGAACTCGTTTCCCTTTCTCTTGGATTGACATCTAACGATTTGAGTCCGAGCAAGGAGGGGAAGAAGAACAGAAATGGAGAAGGCAAGAATTTGGATGAAGGGCTTGCACTTGGGTTAGATATCAGATTTAAACCTTCATCAGCTGAAGTTGAAGCTGCAAATATGCCAAGCCCTGCAAGTAGCTTTGAGGAGGAAGTGAAGGAATTACAGGAACCAACTGAGATATGGCCACCAAGCAAAGTGCTCCAGACATTGAGAACTGGGGATAATAATATTGAAGCTTCTCCACAGAATCAGCTCAAGAAAACTAGGGTTTCTATCAGAGCCAGATGTGATACCCAAACAATGAATGATGGATGTCACTGGAGAAAATATGGGCAGAAGATAGCAAAAGGGAATCCATGCCCCCGGGCATACTATCGATGCACCGTCTCACCAACTTGTCCTGTGAGAAAACAGGTGCAAAGATGTGCTGAGGACATGTCCATCTTGATTACCACGTACGAAGGAACACACAATCACCCACTTCCTCTTTCAGCCACTGCCATGGCCTCCACAACTTCAGCTGCTGCTTCCATGCTTCAATCTCCCTCCTTGACCTCACAACCAGGATTAATAGTCAATTCAATGGCAGCCCCCATTATTAGCTCCACCACAGCTAATAACCTAAATTTCACCTCCCAAATTTCAAGACCGCAGCAATGCCACTTCCCCAACTCTTCCATTTCAACCTCCAATTCTCACCCTACAATAACACTAGACCTTACTGCCCCACCACCAACTTCCTCTCGTTTTGGAAGATTCACCTCAATGCCAAGgtattcatcatcatcaacaagcctcagtttttcttcttcaagctTCTCTGGTTTACAACCTAACATCCCACAATCACCTTGGAGCACTCCCGCTGGTTACTTCAACTATGGGAATCAACTTACCCACAATGGAAACCAAAGTCTTTCCCTATTAAACACTGGAAAACAACCATTATTCCAGAGCCATTATATTCATCAACCTAATTACATGAGCACCACCAGTCATGGCATTTCTCATCAGCAGCCTTTGCCGGAGACCATTGCTGCGGCAACCAATGCAATCACAAGGGATCCTAAATTCCAGTCAGCATTAGCGGCTGCCCTCACAACATATGTCAGCAATGGAGCTGCTGGTGGAAGGGTTAGTGAAACTCCTGCCTTAAACATGAAGCTAGGTGATGATATGTCCTACAGAAAGAGCACGGTTTACGCTTCTGGCCCGAAAGGCACAAACTTTGAATCACCAAGGCAACTGAATTTGTCTTCATCTTCTGTTAACGCACAACAGGGAAACTTGGTGTTATTTCCAACCTCATTGCCGTCACCACAAGCATCTAAAAGTGCCTCTGGATCTTCTTCTAATAGAAGCAACCAGCTCTTACAGTA 1574 0.432 METKEAEEIGHNKSVQMHFFDILQQDQKQEEAPSKAKGTATDDEENTEESELVSLSLGLTSNDLSPSKEGKKNRNGEGKNLDEGLALGLDIRFKPSSAEVEAANMPSPASSFEEEVKELQEPTEIWPPSKVLQTLRTGDNNIEASPQNQLKKTRVSIRARCDTQTMNDGCHWRKYGQKIAKGNPCPRAYYRCTVSPTCPVRKQVQRCAEDMSILITTYEGTHNHPLPLSATAMASTTSAAASMLQSPSLTSQPGLIVNSMAAPIISSTTANNLNFTSQISRPQQCHFPNSSISTSNSHPTITLDLTAPPPTSSRFGRFTSMPRYSSSSTSLSFSSSSFSGLQPNIPQSPWSTPAGYFNYGNQLTHNGNQSLSLLNTGKQPLFQSHYIHQPNYMSTTSHGISHQQPLPETIAAATNAITRDPKFQSALAAALTTYVSNGAAGGRVSETPALNMKLGDDMSYRKSTVYASGPKGTNFESPRQLNLSSSSVNAQQGNLVLFPTSLPSPQASKSASGSSSNRSNQLLQ 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01450 524 SUPERFAMILY WRKY DNA-binding domain 159 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01450 524 SMART WRKY_cls 166 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01450 524 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 3 505 IPR044810 GO:0003700
Bva08g01450 524 PANTHER WRKY TRANSCRIPTION FACTOR 72B 3 505 - -
Bva08g01450 524 Pfam WRKY DNA -binding domain 167 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01450 524 MobiDBLite consensus disorder prediction 51 66 - -
Bva08g01450 524 Gene3D WRKY domain 151 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g01450 524 MobiDBLite consensus disorder prediction 24 43 - -
Bva08g01450 524 ProSiteProfiles WRKY domain profile. 161 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g01450 524 MobiDBLite consensus disorder prediction 1 82 - -
Bva08g01450 524 MobiDBLite consensus disorder prediction 468 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01450 Bva-Chr8 7591589 7595149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01450 13 438 WRKY Transcription Factor Family AT5G15130 42.544 2.24e-69 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva08g01450 WRKY 6.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01450 - - lang:109339108 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01450 08 7591589 7595149 Bva05g00452 05 2234077 2237079 BWGD
Bva05g01195 05 6200726 6204385 Bva08g01450 08 7591589 7595149 BWGD
Bva08g01450 08 7591589 7595149 Bva08g01450 08 7591589 7595149 ECH
Bva08g01450 08 7591589 7595149 Bva06g01250 06 9605082 9608711 ECH
Bva08g01450 08 7591589 7595149 Bva05g00452 05 2234077 2237079 ECH
Bva08g01450 08 7591589 7595149 Bva03g01286 03 12537111 12540217 ECH