Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01445 ATGGAGCTTACCTCTGTGAAATCTGAATTAATTCCAAGAAGTCATAGGATGCTGATGATGGAGGCTGAGAATAATGGGAATAAGTGTGTCAAAAGACGGCGAAGAGATTCATCTACGGCGGCATTGGGGGGAAATGAGCAACATGGTGAACAGACACAAGAGCTGCAGCAACCACAGGGTGATCAATCAACCACCACCGTCAAGAGAAGCTCAAGGTTCCGCGGAGTTAGCAGCAGACATAGGTGGACTGGACGCTATGAAGCCCACCTTTGGGATAAGGGGACCTGGAATCCAacccagaagaagaaaggaaagcaaGGGGCCTATAATGATGAAGAAGCTGCCGCGAGGGCCTATGATTTGGCTGCACTCAAGTACTGGGGAACATCAACCTTCACAAATTTCCCTGTACCTGACTATGAGAATGAAATTGAGATGATGAAAACTGtaacaaaagaagaatatcTTGCTTCTCTGAGAAGGAGAAGTAGTGGGTTTTCTAGAGGTGTATCAAAGTACAGAGGAGTAGCAAGGCACCATCACAATGGGAGATGGGAAGCAAGGATAGGGAGAGTGTTTGGCAACAAGTATCTCTACCTTGGAACCTACAGTACACAAGAAGAGGCTGCTAGAGCATACGATATTGCAGCAATTGAATATAGGGGCATAAATGCAGTGACAAACTTTGACTTGAGCACATATATAAGATGGCTTAGACCAGGGGTACAATCTGCTGCTTCTCAAGAACAAAAGCCAAGCAGAGAGCCTCAGGCTATGGTACCCTCAAATCTCACCCCAAACAGAGGAACCACTGAGCTATCTGACTTCAACCTCCATCCATTTCCCATAAGTGACAAAGAAAGCACCAAGAAACGAGACCTTTCCCAGTATCTGGCCCCTTCAAGTCCTAGCACCAAGTCATCTTCCCCAACAGCATTAGGGCTTCTGCTAAAATCTTCAGTATTCAGAGAACTGATGCAGAGAAATTGGAACTCCACCAATGAAGATGCTGAAGAAGATGGAAGAAAAACCCCACTAGAAAGCAGTGATGGGATTGGAAGCATTTTTGATAATGAAATTGCCAATGCCTCTTACAACATGTGTCCTTCCAATAGCAACAGATTACCAAACTTGGAGTCAACAGAAGAGAGCACATTGCCACTATACCATAAAACTGTGCAATCCCTATGGAATGGTGCTCTGAACACGTCTAACTG 1217 0.4388 MELTSVKSELIPRSHRMLMMEAENNGNKCVKRRRRDSSTAALGGNEQHGEQTQELQQPQGDQSTTTVKRSSRFRGVSSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYNDEEAAARAYDLAALKYWGTSTFTNFPVPDYENEIEMMKTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGVQSAASQEQKPSREPQAMVPSNLTPNRGTTELSDFNLHPFPISDKESTKKRDLSQYLAPSSPSTKSSSPTALGLLLKSSVFRELMQRNWNSTNEDAEEDGRKTPLESSDGIGSIFDNEIANASYNMCPSNSNRLPNLESTEESTLPLYHKTVQSLWNGALNTSN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01445 405 MobiDBLite consensus disorder prediction 23 78 - -
Bva08g01445 405 ProSiteProfiles AP2/ERF domain profile. 72 136 IPR001471 GO:0003700|GO:0006355
Bva08g01445 405 CDD AP2 171 232 IPR001471 GO:0003700|GO:0006355
Bva08g01445 405 ProSiteProfiles AP2/ERF domain profile. 172 230 IPR001471 GO:0003700|GO:0006355
Bva08g01445 405 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 399 - -
Bva08g01445 405 SUPERFAMILY DNA-binding domain 71 137 IPR016177 GO:0003677
Bva08g01445 405 SUPERFAMILY DNA-binding domain 171 232 IPR016177 GO:0003677
Bva08g01445 405 MobiDBLite consensus disorder prediction 246 311 - -
Bva08g01445 405 Gene3D AP2/ERF domain 171 232 IPR036955 GO:0003700|GO:0006355
Bva08g01445 405 Gene3D AP2/ERF domain 71 137 IPR036955 GO:0003700|GO:0006355
Bva08g01445 405 MobiDBLite consensus disorder prediction 246 274 - -
Bva08g01445 405 MobiDBLite consensus disorder prediction 40 72 - -
Bva08g01445 405 Pfam AP2 domain 171 222 IPR001471 GO:0003700|GO:0006355
Bva08g01445 405 Pfam AP2 domain 72 128 IPR001471 GO:0003700|GO:0006355
Bva08g01445 405 MobiDBLite consensus disorder prediction 331 352 - -
Bva08g01445 405 MobiDBLite consensus disorder prediction 294 311 - -
Bva08g01445 405 SMART rav1_2 72 142 IPR001471 GO:0003700|GO:0006355
Bva08g01445 405 SMART rav1_2 172 236 IPR001471 GO:0003700|GO:0006355
Bva08g01445 405 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01445 Bva-Chr8 7575174 7577408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01445 68 234 AP2-EREBP Transcription Factor Family AT5G57390 67.647 3.26e-77 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bva08g01445 AP2 3e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01445 - - gmx:100799621 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01445 08 7575174 7577408 Bva08g01445 08 7575174 7577408 ECH