Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01432 ATGGCGAGTGGCAAAGTTTATGGTGCTTCCAACATGACCGTTTTGCTCCAAAACGATAGGCTTCCTTGCTCCTCTGAAGTTCTCGAGTCTCTCTGGGTTCACCCCGCTGACCCTTCTTTTCAAGGTTCAAAATCTATGGTTGATTTCGAGAATGCTAGCAGCAACCCAGACGGGGCTTTCTTCGAAAGGCTTGAAAAGGAAGAGAACATTGATGTAGATTTCGACTCTTGCTTTCATCAACCTGGAAAGAAGAGGCGGCTCACAAGCGAACAAGTTCAGTTCCTTGAAAGGAACTTTGAGGTAGAAAACAAGCTTGAACCCGAAAGAAAAGTCCAACTAGCAAAAGAGCTTGGCTTGCAGCCTAGGCAAGTTGCAATATGGTTCCAAAACCGAAGAGCTCGGTTCAAGACCAAACAACTCGAGAGAGACTATGGCACATTGAAGGCTAGCTTTGACAGGCTCAAAAGCGATTATGACAATCTCTTTCACGAGAACGAGAAGTTAAAACAAGAGGTGAATTCCCTCAAGGAAAGATTGAGTGCTAGagacaaagagaaagagaattcTAACTGTGATAAGCCTTCTTCCCCAGATAAAGATCAGGCTCCGGATGTGATTTCAAATGCAGTTTCTGAAAATGGGTCTAAAGTGGCAACGATGATCTGCAAACAGGAAGATGCCAATTCAGCTAAAAGTGATGTGTTTGATTCTGATAGCCCACATTACACCGATGGCAACCATTCAACTTCATTCTTGGAGCCTGCACATTCCTCTCATGCTTTTGAACCAGATCAGTCAGATTTCTCACAAGACGAAGAAGATAACCTAAGTGACAAGCTTTTGACCCAGCTCCCTTGCTTGCCAAAGGCTGAGGATTGCTACTATGATCACGATGACCCACCTCACAATTCTTGTCATTTTGGGTTACCTGTTGAAGATCAAACCTTCTGTTTTTGGCCTTATTG 965 0.4321 MASGKVYGASNMTVLLQNDRLPCSSEVLESLWVHPADPSFQGSKSMVDFENASSNPDGAFFERLEKEENIDVDFDSCFHQPGKKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLERDYGTLKASFDRLKSDYDNLFHENEKLKQEVNSLKERLSARDKEKENSNCDKPSSPDKDQAPDVISNAVSENGSKVATMICKQEDANSAKSDVFDSDSPHYTDGNHSTSFLEPAHSSHAFEPDQSDFSQDEEDNLSDKLLTQLPCLPKAEDCYYDHDDPPHNSCHFGLPVEDQTFCFWPY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01432 321 MobiDBLite consensus disorder prediction 179 199 - -
Bva08g01432 321 Pfam Homeobox associated leucine zipper 138 179 IPR003106 GO:0006355|GO:0043565
Bva08g01432 321 Gene3D - 140 182 - -
Bva08g01432 321 SUPERFAMILY Homeodomain-like 73 140 IPR009057 -
Bva08g01432 321 MobiDBLite consensus disorder prediction 229 274 - -
Bva08g01432 321 ProSitePatterns 'Homeobox' domain signature. 113 136 IPR017970 GO:0000981|GO:0006355
Bva08g01432 321 ProSiteProfiles 'Homeobox' domain profile. 78 138 IPR001356 GO:0003677
Bva08g01432 321 MobiDBLite consensus disorder prediction 179 205 - -
Bva08g01432 321 CDD homeodomain 81 139 IPR001356 GO:0003677
Bva08g01432 321 Pfam Homeodomain 83 136 IPR001356 GO:0003677
Bva08g01432 321 Gene3D - 76 139 - -
Bva08g01432 321 Coils Coil 151 185 - -
Bva08g01432 321 PRINTS Lambda-repressor HTH signature 109 118 IPR000047 GO:0003677
Bva08g01432 321 PRINTS Lambda-repressor HTH signature 118 134 IPR000047 GO:0003677
Bva08g01432 321 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 1 321 - -
Bva08g01432 321 SMART HOX_1 80 142 IPR001356 GO:0003677
Bva08g01432 321 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 321 IPR045224 GO:0003700
Bva08g01432 321 MobiDBLite consensus disorder prediction 241 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01432 Bva-Chr8 7494999 7496842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01432 42 244 Homeobox Transcription Factor Family AT3G01470 46.602 1.48e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva08g01432 Homeodomain 3.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01432 - K09338 qsu:112000549 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01432 08 7494999 7496842 Bva08g01432 08 7494999 7496842 ECH