Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01417 ATGGGTGCAGTGGACTACTACCGGATACTGAAGGTGAATCCAAATGCCACCGATGAGGAGCTGAAGAAGGCGTACAGGAGATTGGCAATGAAATGGCACCCAGATAAGAATCATCAACACCCAGTTAGGCAAGATGAAGCAGAGGCCAAATTCAAGCAAATCTCTGAGGCTTATGAAGTTCTGAGTGACCCCAGGAAGCGCCAGATCTATGATTTCTATGGGGAATATCCTCTCAATTCTAATACGGTCAACAAGGAAAATGGAAATGGGAATTTTGGTTTTGGGAATCCGAAAGAGAAGGACAAGAAGGGAGGGGCAACAGCAACTGAGTCCAAATTGGCATGTAGCCTTGAGGATCTTTACAAGGGCTGCAAAAAGAAGCTGAAAATCTCGAGGACTGTTATTGATGAGTTCGGTAAGTTGAACACTGTTGAAGAATCCTTGAAGATAGATATACAGCCTGGTTGGAAGAAGGGcacaaaaattacttttcCTGAGAAAGGACACCAAGAGCCTGGAACTACTGCTCCTGGTGATCTAATCTTTGTGGTGGATGAGAAACCTCATGCTTTCTTCAAGAGGGATGGAAATGATTTGGTGTTTGTGCAGAAAATATTGCTTCTAGAAGCTCTCACGGGGAAGACTCTCAACTTGACAACCTTGGATGGAAGAAACCTCACAATCCAAGTAACAGATATTGTGAAACCAGACTATGAAATGGTGATCCCAAACGAAGGAATGCCCATTGCAAAGAAACCCGGCAAGAAAggaaaactgaaaattaaGTTTGATGTGATGTTTCCATCACGGCTGACCACACAACAGAAGCATGATGTGAAGAGGATTCTCAGTGAAGATGACGAGTG 866 0.4273 MGAVDYYRILKVNPNATDEELKKAYRRLAMKWHPDKNHQHPVRQDEAEAKFKQISEAYEVLSDPRKRQIYDFYGEYPLNSNTVNKENGNGNFGFGNPKEKDKKGGATATESKLACSLEDLYKGCKKKLKISRTVIDEFGKLNTVEESLKIDIQPGWKKGTKITFPEKGHQEPGTTAPGDLIFVVDEKPHAFFKRDGNDLVFVQKILLLEALTGKTLNLTTLDGRNLTIQVTDIVKPDYEMVIPNEGMPIAKKPGKKGKLKIKFDVMFPSRLTTQQKHDVKRILSEDDE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01417 288 MobiDBLite consensus disorder prediction 84 105 - -
Bva08g01417 288 Gene3D - 189 269 - -
Bva08g01417 288 SUPERFAMILY HSP40/DnaJ peptide-binding domain 191 277 IPR008971 GO:0006457|GO:0051082
Bva08g01417 288 Pfam DnaJ C terminal domain 110 268 IPR002939 -
Bva08g01417 288 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 285 - -
Bva08g01417 288 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Bva08g01417 288 CDD DnaJ 5 63 IPR001623 -
Bva08g01417 288 Pfam DnaJ domain 5 71 IPR001623 -
Bva08g01417 288 Gene3D DnaJ domain 2 93 IPR036869 -
Bva08g01417 288 CDD DnaJ_C 110 249 - -
Bva08g01417 288 PRINTS DnaJ domain signature 46 66 IPR001623 -
Bva08g01417 288 PRINTS DnaJ domain signature 25 40 IPR001623 -
Bva08g01417 288 PRINTS DnaJ domain signature 7 25 IPR001623 -
Bva08g01417 288 PRINTS DnaJ domain signature 66 85 IPR001623 -
Bva08g01417 288 SUPERFAMILY Chaperone J-domain 2 93 IPR036869 -
Bva08g01417 288 ProSiteProfiles dnaJ domain profile. 5 74 IPR001623 -
Bva08g01417 288 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 285 - -
Bva08g01417 288 SMART dnaj_3 4 66 IPR001623 -
Bva08g01417 288 SUPERFAMILY HSP40/DnaJ peptide-binding domain 111 189 IPR008971 GO:0006457|GO:0051082
Bva08g01417 288 Gene3D - 108 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01417 Bva-Chr8 7421361 7423563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01417 6 73 C2H2 Transcription Factor Family AT1G74250 39.130 1.58e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01417 K09510 - gmx:100786068 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01417 08 7421361 7423563 Bva08g01417 08 7421361 7423563 ECH