Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01416 ATGGGGTGTGCAATAAGCAATAGTTATGAGCTCAATTTACCTcagTTGAAGTTTCCCTCAGAAGCAACCAAAATGTCACGTAAGGGTTTGATGGAGCAAGACCTGAGTAAGCTGGATGTCACGAAATTGCATCCACTTTCTCCTGAAGTCATATCACGACAGGCTACCATTAATATTGGTACCATTGGCCATGTGGCTCATGGTAAGTCCACCGTTGTCAAAGCAATATCAGGCGTTCAGACTGTTCGTTTTAAAAACGAGTTGGAACGTAATATTACAATCAAACTTGGCTATGCAAATGCAAAGATTTACAAATGTGAAGATGAACGGTGCCCCAGGCCTATGTGCTACAAGGCATATGGAAGTGGAAAAGAGGACAGTCCAATGTGTGATGTGCCAGGGTTTGAAAACTGCAGGATGAAATTGTTGAGACATGTTTCTTTTGTGGATTGCCCAGGCCACGATATTCTCATGGCTACAATGCTCAATGGAGCAGCAATCATGGATGGAGCTTTGCTACTCATAGCTGCTAATGAGAGCTGTCCACAACCACAGACCTCTGAGCATCTAGCTGCTGTGGAAATTATGCGTCTACAACATATAATAATTCTTCAGAATAAGGTTGACCTGATTCAAGAAAATGTCGCAATCAATCAACACGAAGCAATTCAAAAGTTTATACAAGGCACTGTTGCTGATGGTGCACCAGTAGTGCCAATTTCAGCTCAGCTGAAGTATAATATTGATGTCGTGTGTGAGTATATTGTGAAGAAGATCCCAATCCCTGAAAGGAACTTTATTTCTCCTCCTAATATGATTGTAATTCGGTCATTTGATGTTAATAAGCCTGGGTATGAAGTTGATGAAATAAAAGGAGGTGTAGCTGGTGGAAGCATTCTCAGGGGTGTTTTGAGGGTTAACCAATTTATTGAAGTTCGACCTGGGATAGTTGTTAAAGACGAGAGTGGGAATATTAGATGCACACCCATATATTCCAGAATTGTTTCATTGTATGCTGAGCAAAATGAACTTCAGTTTGCTGTACCTGGAGGACTGATTGGTGTTGGCACCACCATGGATCCCACTTTGACACGTGCTGACAGGTTGGTGGGGCAAGTTCTTGGAGAGGTTGGATCACTTCCTGAGGTTTATGTTGAACTTGAGGTGAACTTCTTCTTGCTTCGAAGGCTTCTCGGGGTACGGACAAAAGGATCCGAGAGACAGGGAAGGGTGTCTAAGCTGACCAAGGGAGAGATTCTAATGTTGAACATAGGATCAATGTCAACAGGGGCCAGAGTGATTGCTGTAAAGACTGATTTGGCAAAGTTGCAACTTACATCGCCCGTGTGCACTAGCAAGGGCGAGAAGATTGCACTGAGTAGACGTGTTGAGAAGCATTGGCGTTTAATTGGATGGGGTCAAATCCAAGCTGGAACCACCCTTGATGTCCCACCTGCCCCTGTTTTGAATTA 1472 0.4334 MGCAISNSYELNLPQLKFPSEATKMSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCPRPMCYKAYGSGKEDSPMCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLRVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVYVELEVNFFLLRRLLGVRTKGSERQGRVSKLTKGEILMLNIGSMSTGARVIAVKTDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLDVPPAPVLN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01416 490 Gene3D Translation factors 381 480 - -
Bva08g01416 490 CDD eIF2_gamma_II 265 378 IPR044127 GO:0000049
Bva08g01416 490 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 379 476 IPR009001 -
Bva08g01416 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 266 IPR027417 -
Bva08g01416 490 Gene3D - 54 264 IPR027417 -
Bva08g01416 490 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 25 487 - -
Bva08g01416 490 Pfam Elongation factor Tu GTP binding domain 56 260 IPR000795 GO:0003924|GO:0005525
Bva08g01416 490 CDD eIF2_gamma 57 264 IPR044128 GO:0005525
Bva08g01416 490 Gene3D Translation factors 267 380 - -
Bva08g01416 490 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 25 487 - -
Bva08g01416 490 Pfam Initiation factor eIF2 gamma, C terminal 386 475 IPR015256 -
Bva08g01416 490 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 54 263 IPR000795 GO:0003924|GO:0005525
Bva08g01416 490 PRINTS GTP-binding elongation factor signature 147 157 IPR000795 GO:0003924|GO:0005525
Bva08g01416 490 PRINTS GTP-binding elongation factor signature 58 71 IPR000795 GO:0003924|GO:0005525
Bva08g01416 490 PRINTS GTP-binding elongation factor signature 163 174 IPR000795 GO:0003924|GO:0005525
Bva08g01416 490 PRINTS GTP-binding elongation factor signature 201 210 IPR000795 GO:0003924|GO:0005525
Bva08g01416 490 Pfam Elongation factor Tu domain 2 292 374 IPR004161 GO:0005525
Bva08g01416 490 SUPERFAMILY Translation proteins 264 378 IPR009000 -
Bva08g01416 490 CDD eIF2_gamma_III 381 475 IPR015256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01416 Bva-Chr8 7415067 7420573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01416 25 487 Eukaryotic Initiation Factors Gene Family AT1G04170 91.379 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01416 K03242 - mnt:21409782 901.353