Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01411 ATGGCTCCACCCCCATTTTATTTCTCCACCATAGTCTCAGCCAGAGCCACCCTCTGCTTCATTCTCTGTATAGTAACGGTGCTTTTAGTATCTGCAACAGCCCACACATGCCCTTCTAACCCAGAAATCTCTACATTACCTTGCCCACCATTCACTTCCAATCCTCCATTTCCATTCTCATCTTCACCTGGGTGTGGCCACCCTTCTTTCCAGATAAAATGCTTTACTCCTCACTCTGTCATCTCCATTAAccatctctctttctctgttcTTAACTATGAACCCAACTCCTCTTCAGTTTCCCTCTCCCCTCATCCACCTGAGACCAAGAGTGCAACTTCAGTAGTCAACAAAAATTGCTCCTTTCCTCACTTCCTTTCGATTCCCGATCGCTCCATCAATTTCTCTGGCTCGCCTTTCAGAGTCTCTGATGCCTCGTGCTCTCGCCTCCATCGACTCCAACCTTGTTCCCCTCCAAGTCTACCAAACTGTAGCCATTGTCCATGGGAATGCAGGCTCATCAAGAACCCAGCTCAGCTTCTTCGTGACTGTGGATCTACGGCCCATCCCGATTTAGATTTAGAGCAGGGTTGTCAAAGCGACGTTTTGGGGTTCCTCAATAATATCTTAACTTTAGGGATCCAGGTTGAATGGGAAGAAGCAGGAGACCCTTACTTTTCTGGTTGCAAAGATTGCAGAGCAAAAAATGGTGTCTGTGGCTTCAATTTGACAGACCCAGATAAGCAATTTATCTGCTTTCACGCCCAATCTAGCTTCTCACCTGCTTGGGTTCATAGGGTGAAGCCCAATCGAATGGCCATTTTGTCCCTGTCAGTTGCGTTAACGTCGTTGCTGCTTGTTGTCTGTGTTGCCACTGCAATTTTCCGCAACAGAAGGTTGAAATCGTCGGCCACCGAGGAAGACCCAACGACCCTTTTCCTTCACAATCAACGTTCTGCGAGTCTTCTTCCTCCTGTGTTCACCTTCGAAGAGCTGCAAACTTCTACCAATAATTTTGATCCGAAGCGCAAAATTGGAGACGGCGGGTTCGGTTCGGTGTACCTTGGCCAGCTCTTCGATAGCCGAATTGTCGCCGTGAAGTACCTCCACAAGCACCACTCCACCGCCGCGGCGGGGAAAGCTTTCTCCACCAAGTCATTTTGCaatgaaattttgattctttcttcCATAGATCACCCAAATCTTGTTAAGCTCCATGGCTATTGCAGCGATCCAAGAGGATTGCTTCTCATATACGACTACGTCCCTAATGGAACTCTTTCAGATCATCTCCATGGCCCAAAGAGCTTGTACAGAAAAGGGTCTTTGACTTGGCAAGTGAGGCTTGAAATTGCTCTGCAAACAGCTCTAGCCATGGAGTACCTTCACTTCTCAGTTGTGCCACCCATTGTTCACAGAGACATAACCTCATCAAATATATTCGTAGAGAAGGATATGAGGATCAAAGTTGGAGACTTTGGGCTCTCCAGGCTCCTGGTTTTGCAAGAGACGTCGTCGTCAACTGGTTATGTCTGGACAGGGCCCCAAGGGACACCCGGGTACTTGGATCCGGATTACCACCGATCGTTCCGGTTAACGGAGAAAAGCGACATTTACAGCTTCGGAGTGGTGTTGTTGGAGTTGATTTCCGGGTTGAAAGCGGTGGACCAGACCAGAGACAAGCGCGAAATGGCCTTGGCTGATTTGGTGGTGTCAAGAATCCAGATGGGTCAGCTTCATCAAGTGGTGGACCCGGTTCTGGCGCTGGAAGAGGAAGCAATGGACGCAGTTGCGGCGGTGGCAGAGCTGGCGTTCCGGTGCGTGGCAGATGATAAGGACGACAGGCCCGATTCGAAGGAGGTGGTGGAGGAGCTGAAGCGGGTTCGGATCCGATCACGGGGACTCCGATCTTCGAACTCCAATACGGATGATGAAGTGGCAAAGACCCAAGGAGGATGTTA 1961 0.4865 MAPPPFYFSTIVSARATLCFILCIVTVLLVSATAHTCPSNPEISTLPCPPFTSNPPFPFSSSPGCGHPSFQIKCFTPHSVISINHLSFSVLNYEPNSSSVSLSPHPPETKSATSVVNKNCSFPHFLSIPDRSINFSGSPFRVSDASCSRLHRLQPCSPPSLPNCSHCPWECRLIKNPAQLLRDCGSTAHPDLDLEQGCQSDVLGFLNNILTLGIQVEWEEAGDPYFSGCKDCRAKNGVCGFNLTDPDKQFICFHAQSSFSPAWVHRVKPNRMAILSLSVALTSLLLVVCVATAIFRNRRLKSSATEEDPTTLFLHNQRSASLLPPVFTFEELQTSTNNFDPKRKIGDGGFGSVYLGQLFDSRIVAVKYLHKHHSTAAAGKAFSTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLIYDYVPNGTLSDHLHGPKSLYRKGSLTWQVRLEIALQTALAMEYLHFSVVPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVLQETSSSTGYVWTGPQGTPGYLDPDYHRSFRLTEKSDIYSFGVVLLELISGLKAVDQTRDKREMALADLVVSRIQMGQLHQVVDPVLALEEEAMDAVAAVAELAFRCVADDKDDRPDSKEVVEELKRVRIRSRGLRSSNSNTDDEVAKTQGGC 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01411 653 Pfam Protein tyrosine and serine/threonine kinase 342 625 IPR001245 GO:0004672|GO:0006468
Bva08g01411 653 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 37 634 IPR045274 GO:0007166
Bva08g01411 653 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Bva08g01411 653 CDD STKc_IRAK 345 627 - -
Bva08g01411 653 MobiDBLite consensus disorder prediction 633 653 - -
Bva08g01411 653 Gene3D Transferase(Phosphotransferase) domain 1 422 650 - -
Bva08g01411 653 ProSitePatterns Tyrosine protein kinases specific active-site signature. 470 482 IPR008266 GO:0004672|GO:0006468
Bva08g01411 653 ProSiteProfiles Protein kinase domain profile. 339 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01411 653 Gene3D Phosphorylase Kinase; domain 1 315 421 - -
Bva08g01411 653 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 37 634 - -
Bva08g01411 653 SUPERFAMILY Protein kinase-like (PK-like) 320 625 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01411 Bva-Chr8 7380435 7382848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01411 19 649 Receptor kinase-like Gene Family AT1G69910 62.404 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva08g01411 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01411 - - pmum:103321651 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01411 08 7380435 7382848 Bva08g01411 08 7380435 7382848 ECH