Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01395 ATGAACGGATGGAATAAGATTTCGTCCTCATCATCTTCTACGTCAAGATCCAGGAATAACATGAACCATATACCTTCATCTCGAACGGTTCGACTCGGCCGAGTTCAGCCCCAAGCTCCCGGCCACCGCACCATTTTCGCCAATGATCGGGAGGCCAATCAACCCGTCCGATTCAGGGGGAATTCGATATCAACTACAAAATACAACTTTTTCACCTTTTTGCCAAAAGGGCTATTTGAGCAGTTCAGGCGGGTGGCTAATCTCTATTTTCTTACCATCTCAATTCTTTCGACTACACCAATCAGTCCTGTGTCTCCAATTACAAACGTGGTTCCTCTAAGTCTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAACGTTTTCAAAATGACATGGCCATAAACAATAATATGATAGATGTGTTGCAAGATCAAAAGTGGGAATCTATACCCTGGAAAAAGTTGCAGGTTGGAGACATTGTCAAAGTTAAGCAGGATGGATTCTTTCCTGCAGACCTGCTTTTTCTGGCCAGTACAAATCCAGACGGTGTCTGCTAtgttgagACTGCTAATTTGGATGGAGAAACTAATTTGAAGATAAGAAAAGCTTTGGAAAAGACCTGGGACTATCTTACACCAGATAAGGCATCTGAGTTTAAAGGTGAAATTCAGTGTGAACAACCAAACAATTCATTGTACACTTTCACTGGGAATCTTATAATCGAAAACCAAACACTGCCTCTCAGTCCAAATCAAGTTTTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATGTTGTTGCAGTTGTTATTTTTACAGGACATGAAACTAAGGTGATGATGAATGCCATGAACGTTCCTTCCAAAAGAAGTACATTGGAAAGGAAGCTTGATAAACTCATACTCACTCTATTTGCGACTCTCTTCGTGATGTGTTTTATTGGAGCGGTAGGCAGTGGTATCTTTGTAAATGAGAAGTATTTCTACTTACGACTTGGAGAAGATACGGATGGGCAGTTTAACCCCAACAACAGAATGCTGGTTATCACTCTGACTATGTTTACCCTTATCACTCTATACTCGACAATCATCCCCATTTCACTCTATGTGTCAATAGAGATGATCAAATTTATTCAGTCGACTCAATTTATCAACAAGGACCTGAATATGTACCATAGTGAAACCAATACCCCAGCATTGGCCAGAACTTCCAACCTGAACGAAGAACTGGGGCAGGTGGAATACATCTTCTCTGACAAAACTGGAACTCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGCGGAGAGGTATATGGAAATGGCGTCACTGAAATTGAGAGGGAACTAGCAGAACGTAATGACATGAAAATTGAGGAAAATACATCAGCAAAAGGAGTGCTAGAAAAgggttttaattttgatgatgCTAGGATTATGCGAGGAGCTTGGAGGAATGAGCCCAATCCTGATATATGCAAGGAATTTTTCAGATGCCTTGCTATATGCCACACTGTACTTCCTGAGGGCGATGAGTCCCCTGAGAAGATCCGATATCAAGCTGCATCACCCGATGAGGCTGCTTTGGTTACTGCTGCAAAGAACTTTGGTTTCTTCTTCTACAGACGCACACCTACCTTGATATATGTTCGAGAATCTCATGTTGAGAAGATGGGCAGCATTCAAGATGTATCTTATGAGATTTTGAATGTACTTGAGTTCAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAAATGGAAGACTTGTATTGTACTGCAAGGGTGCTGATACTGTAATCTTTGAGAGATTAGCTGATGGTAATAATGATATAAAGAAAGTGACTAGGGGACATTTGGAACAATTTGGAGCTGCTGGGTTACGTACACTATGTCTGGCCTACAAAGACTTGCATCCTGATGTGTATGAAAGCTGGAATGAGAAGTTCATCCAGGCCAAATCTTCTCTACGTGATCGTGAAAAGAAGTTAGATGAgGTGGCAGAACTGATAGAAAATGATCTTATTTTGATTGGTAGCACAGCCATAGAAGATAAGCTTCAAGAGGGGGTACCAGCCTGTATAGAGACTCTTTCTAGAGCTGGGATCAAAATTTGGGTGCTTACCGGGGACAAGATTGAAACAGCAATAAATATAGCATATGCATGCAATTTGATAAACAATGAGATGAAGCAATTTATCATCAGTTCAGAAACTGATGCCATTAGAGAAGTTGAGGAAAGGGGTGATCAAGTGGAAATTGCACGTTTTATTAAAGAAGAAGTGAAAAAGGATCTGAAGAGGTTCCTTGAGGAAGCACAGAATTATCTTAGCTCTCAATCAGGACCAAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTAGATCCAACTTTGAGAGTGTCACTGCTGAACTTGAGTTTGAATTGCCATGCAGTTGTATGCTGCCGGGTTTCTCCTTTACAGAAAGCACAGGTCACAAGTCTGGTTAAGAAAGGtgccaaaaaaataacactTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGCTGGAAGGGATGCAAGCAGTGATGGCCAGTGATTTTGCTATTGCCCAGTTTCGTTATCTTGCAGATTTGCTTCTTGTTCATGGACGGTGGTCATATATTCGAATATGCAAGGTGGTGACATACTTTTTTTACAAGAATCTCACTTTCACTCTTACTCAGTTTTGGTTTACTTTTCAAACCGGATTTTCTGGTCAAAGGTTCTATGATGATTGGTTTCAATCATTGTATAATGTTATCTTTACGGCACTGCCTGTGATCATTGTTGGACTTTTTGACAAGGATGTCAGTGCATCTCTTTCCAAGAAGTACCCTGAACTATACAGGGAGGGTataagaaatatgttttttaaatggAGAGTGGTGGCAATATGGGCTTTTTTTTCTGTCTACCAGTCTCTaatattcttctattttgtgACTACGTCAAGTTTCAATGCTAAAAACTCAGAAGGTAAAACCTTCGGACTCTGGGATGTCAGCACAATGGCCTTCACGTGTGTTGTAGTAACTGTCAACTTGCGACTCCTTATGATATGTAACTCGATTACAAGGTGGCACTACATTAGTGTTGGAGGAAGTATATTGGCGtggtttttatttgttttcatatattcAGGGATCAGCACTCCATATGATCGACAAgagaatatttattttgtcatatatgtCATTATGAGTACAATTTATTTCTATGTCACTCTTCTTCTTGTCCCCGTTGTTGCGCTTTTTGGTGACTTCATCTACCAAGGGATTCAAAGATGGTTCTTCCCCTATGATTATGAGATTGTTCAGGAAATGCATAAACATGAACCTGATAACACCAGCAGAGCACAACTGCTGGAGATAGGGAACCAGCTTACACCAGCCGAGGCAAGGAGCTACGCCATATCTCAACTCCCTCGTGAGATTTCAAAGCACACTGGTTTTGCTTTTGATTCACCTGGGTACGAGTCCTTCTTCGCTTCACAACTAGGTATATATGCCCCACAAAAAGCTTGGGATGTTGCAAGACGAGCTAGTGCCAAGTCACGGCCCAAGaaccagaaaaaata 3671 0.398 MNGWNKISSSSSSTSRSRNNMNHIPSSRTVRLGRVQPQAPGHRTIFANDREANQPVRFRGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVVPLSLVLLISLIKEAFEDWKRFQNDMAINNNMIDVLQDQKWESIPWKKLQVGDIVKVKQDGFFPADLLFLASTNPDGVCYVETANLDGETNLKIRKALEKTWDYLTPDKASEFKGEIQCEQPNNSLYTFTGNLIIENQTLPLSPNQVLLRGCSLRNTEYVVAVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAVGSGIFVNEKYFYLRLGEDTDGQFNPNNRMLVITLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLNMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERELAERNDMKIEENTSAKGVLEKGFNFDDARIMRGAWRNEPNPDICKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVTAAKNFGFFFYRRTPTLIYVRESHVEKMGSIQDVSYEILNVLEFNSTRKRQSVVCRYPNGRLVLYCKGADTVIFERLADGNNDIKKVTRGHLEQFGAAGLRTLCLAYKDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLSRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSETDAIREVEERGDQVEIARFIKEEVKKDLKRFLEEAQNYLSSQSGPKLALVIDGKCLMYALDPTLRVSLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGAKKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYIRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNMFFKWRVVAIWAFFSVYQSLIFFYFVTTSSFNAKNSEGKTFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFLFVFIYSGISTPYDRQENIYFVIYVIMSTIYFYVTLLLVPVVALFGDFIYQGIQRWFFPYDYEIVQEMHKHEPDNTSRAQLLEIGNQLTPAEARSYAISQLPREISKHTGFAFDSPGYESFFASQLGIYAPQKAWDVARRASAKSRPKNQKK 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01395 1223 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 825 931 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g01395 1223 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1130 IPR023298 -
Bva08g01395 1223 Pfam E1-E2 ATPase 140 378 - -
Bva08g01395 1223 Gene3D - 123 288 - -
Bva08g01395 1223 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 428 690 IPR023299 GO:0000166
Bva08g01395 1223 SUPERFAMILY Calcium ATPase, transduction domain A 140 284 IPR008250 -
Bva08g01395 1223 PRINTS P-type cation-transporting ATPase superfamily signature 421 435 - -
Bva08g01395 1223 PRINTS P-type cation-transporting ATPase superfamily signature 852 871 - -
Bva08g01395 1223 Pfam Phospholipid-translocating ATPase N-terminal 45 109 IPR032631 -
Bva08g01395 1223 Pfam Phospholipid-translocating P-type ATPase C-terminal 880 1130 IPR032630 -
Bva08g01395 1223 MobiDBLite consensus disorder prediction 1 33 - -
Bva08g01395 1223 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 21 1219 - -
Bva08g01395 1223 Pfam Cation transport ATPase (P-type) 518 612 - -
Bva08g01395 1223 SFLD Haloacid Dehalogenase 403 903 - -
Bva08g01395 1223 Gene3D - 685 892 IPR023214 -
Bva08g01395 1223 SUPERFAMILY HAD-like 416 908 IPR036412 -
Bva08g01395 1223 Coils Coil 767 787 - -
Bva08g01395 1223 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 21 1219 - -
Bva08g01395 1223 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1138 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bva08g01395 1223 ProSitePatterns E1-E2 ATPases phosphorylation site. 423 429 IPR018303 -
Bva08g01395 1223 Gene3D - 550 684 IPR023299 GO:0000166
Bva08g01395 1223 MobiDBLite consensus disorder prediction 1 34 - -
Bva08g01395 1223 CDD P-type_ATPase_APLT_Dnf-like 60 1012 - -
Bva08g01395 1223 SFLD p-type atpase 403 903 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01395 Bva-Chr8 7302007 7321652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01395 11 1223 Primary Pumps ATPases AT1G59820 79.572 0.0 2067
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01395 K14802 - gmx:100815547 2177.9