Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01394 ATGGTCGACCCGTCTCACGTTCGACATCAGAAGGGTCCCTTCGAAGAGGCTTTTCGGGAACATGAAGAAAGGTTTGGGAGTGAAAGGGTTCATCCGTGGAGAGAAGCTATGAAGAAAGTTGGTGGGGTCGTTGGTTTGGTTTTCCAGGACAGGGAAGAAGCTATTCTAATCGAACGTTTGGTGCGGAGGGTTTTGAAAGAACTGAGTAATACTCCAAGAGATTATGCCATTGATGTACTGAGAAGTTTTGGTTTTAGGGGAGAGATAGCAATCACAGTCCTCACAGAAAAATGCTTGATCAAAATCACCCCGGAGAATACCCTGGCAATGCATGATCAAATTAGAGACATGGGAAGACAAATTGTTCTGGAAGAAAACCTTGTTGATCCTGCTATGCGTAGTAGATTGTGGAATCGTTCTGAAATCATGGCTGTCTTGAAACATGACACGGGAACGAGATGTATTCAAGGGATTGTCCTAGACTTCGAGAGAAAAATACATGTTGAAGATATAGAGAAAGACAAAGAGGTTCTACTTCCCACGAGATCCTTTGAACAAATGGTTAACCTGAGAATGCttcaaatcaataatttgAGAATGGAAGGTAACTTTAAATTCCTTCCTGCACAACTGAAGTGTCTACAATGGCAAAAGTGTCCTTTGGAACGCATGCCTTCAGACTTCTACCCTCGGGAACTGGCTATCCTTGATCTCTCATACAGTCACCAGATAAAAAACTTGTGGGGCTGGAAAAGCTATAAGGTGCCAGAAAACTTACTGGTCATGAACCTGTCTTACTGTGTAAATCTAGCTGCTGTACCTGATCTATCTGCATGTCAACATTTAGAGAAGATTGATCTCGAGGGATGCACCAGTATAGTGAAGATTCATGAATCAATTGGCAATTTGATTAAGTTACGTCATTTGAATTTGAGCGATTGTTCAAACCTTATTGAACTACCCAGTGATATCTATGGGTTGAAGCATCTAGAGAACCTCTTTCTTTCTCGCTGCTCAAAACTTGAAGCATTACCAAAGAACATAGGCTGCATGATATCATTGAGACGACTTCTTCTCGATGACACTGCCATAGCAGAACTACCCGAGTCAATTTTTCACCTGACAAAACTTGAAAAGCTTATTTTAGATGGTTGCATAAATTTGAGAAGGCTACCCCACTGCATTGGGCATCTCTGTTCTCTGCAAGAATTATCTCTTAACCGTTCTGCACTAGAAGAACTACCTGATTCTATTGGATGTTTGGCAAACCTTGAGAAACTTAGTTTGGTGCGTTGTGGATCTCTCACTTCTATTCCTGAAGCTATAGGCAATTTGATATCCTTGACAGAACTTCGGGTTGATAGAAGTGCAATCACAGAAGTACCTTCTTCTATTGGTCAATTATCTTACCTGGGGGAGCTATCAGTTGAAAACTGCAAGTCTCTTAGTAAATTGCCTTGTTCTATTGGAGCTTTGGCTTCTATAGTTGTTCTTCAGTTAAACGGGACAACAATCACAAATTTGCCGGATCAGATTGGGGCTATGAAAACACTGAGAAAGCTTGATATGAGGGATTGTATACATCTAAAATCTTTACCAGAATCTATTGGCAGCCTATTAGGCCTTACTAGTTTGAACTTGTTGAATTCGAACATCAGGGAATTGCCAGAATCCATTGGATTGCTGGAAAATCTTGTCACCTTAAAATTGAACAAATCCAGAATGCTCAGAAAGCTTCCAGCTTCTATAGGAAATTTGAAGTCTTTGTGTCGTTTTCTGATGGAGGAAACTGCTGTGACTGAGTTACCAGAAAGCTTTGGGATGCTCTCAAGTTTAATGATACTAAAAATGGCAAAGAAGCCGGCGGAGGATGAAGTATCCAGTTCAAAAGAGAACCTTAATTCTTTTGTactttcatcttctttctgTAATCTGACCTTGTTAAATTATTTCGATGCTAGTTCCTGGAGAATATCTGGGAAAATTCCAGATGATTTTGAGAAGCTGTCATCATTAGAGACTTTGCTTTTAGGTGGAAACAAATTTCAGAGCCTTCCTTCTAGCCTGAAGGGCCTCTACATTCTCAAGAAGCTTGTGCTGAGAAACTGTAGTGAGCTGACCTCTCTTCCTTCACTTCCTTCCAGCTTGATAGAGTTGGACGCTCAAAACTGCACTGCATTAAAAAGCATATCCGACCTTTCAAACTTGGAGAACTTGCAGATGCTGAACCTCACAAATTGTGCCAAAGTGGAGGATATTCCAGGTCTTGAAAGCTTCAAGTCCTTGAAGGGGTTGGACATGAGTGGTTGCAGTGCATGCACCTTCAGAGTAACGAAAAGACTTTCAAAGGTTTCATTGAGAAAGCTACTGAACTTGAGCATGCCTGGAAGCAGAATTCCAGAATGGTTTTCGGGACAAACTGTGAGCTTTTCCAAGCACAAGAGCCGTGAGCTAAAAGGTGTAATTATAGGTTGTATTGTTTCTATCAACCATAGTATACCTTGTGAAGCACGAAACCATCTCCCGGCAGTGGTTGATGTCCAAGTCAGTGTTCTCAAAATGGGCAAATCTATATATAACGGATCGTTGAGGTTGCATGGGGTGCCAAGGACGAATGAAGAACACATACATTTGTGTCGGTATCTAGATCGTGATCCACTGTTCTTATATTTGCGAGATGGTGACACAGTGCGTGTGAGTAAGCGAAACCCACCTGTTGATAATGGTTTAGAGCTGAGAAAATGTGGGGTTCATTTAATCTATGAAGGGGAAGATGATTATGAAGGAGATGAAGAATCTGTGGACGTAAGCCTACAATCTGTCTCTgaaaaattggttaagttttTCAACACTGGTGAAGAGCAAAAATCACCACATTCTACAAATAactcaagttttcttttcttgtctggTATAGTCTTTGGAATCATAGCTATCACAGCCATTCTGTGTAGGGCTAAGGGGTA 2966 0.4029 MVDPSHVRHQKGPFEEAFREHEERFGSERVHPWREAMKKVGGVVGLVFQDREEAILIERLVRRVLKELSNTPRDYAIDVLRSFGFRGEIAITVLTEKCLIKITPENTLAMHDQIRDMGRQIVLEENLVDPAMRSRLWNRSEIMAVLKHDTGTRCIQGIVLDFERKIHVEDIEKDKEVLLPTRSFEQMVNLRMLQINNLRMEGNFKFLPAQLKCLQWQKCPLERMPSDFYPRELAILDLSYSHQIKNLWGWKSYKVPENLLVMNLSYCVNLAAVPDLSACQHLEKIDLEGCTSIVKIHESIGNLIKLRHLNLSDCSNLIELPSDIYGLKHLENLFLSRCSKLEALPKNIGCMISLRRLLLDDTAIAELPESIFHLTKLEKLILDGCINLRRLPHCIGHLCSLQELSLNRSALEELPDSIGCLANLEKLSLVRCGSLTSIPEAIGNLISLTELRVDRSAITEVPSSIGQLSYLGELSVENCKSLSKLPCSIGALASIVVLQLNGTTITNLPDQIGAMKTLRKLDMRDCIHLKSLPESIGSLLGLTSLNLLNSNIRELPESIGLLENLVTLKLNKSRMLRKLPASIGNLKSLCRFLMEETAVTELPESFGMLSSLMILKMAKKPAEDEVSSSKENLNSFVLSSSFCNLTLLNYFDASSWRISGKIPDDFEKLSSLETLLLGGNKFQSLPSSLKGLYILKKLVLRNCSELTSLPSLPSSLIELDAQNCTALKSISDLSNLENLQMLNLTNCAKVEDIPGLESFKSLKGLDMSGCSACTFRVTKRLSKVSLRKLLNLSMPGSRIPEWFSGQTVSFSKHKSRELKGVIIGCIVSINHSIPCEARNHLPAVVDVQVSVLKMGKSIYNGSLRLHGVPRTNEEHIHLCRYLDRDPLFLYLRDGDTVRVSKRNPPVDNGLELRKCGVHLIYEGEDDYEGDEESVDVSLQSVSEKLVKFFNTGEEQKSPHSTNNSSFLFLSGIVFGIIAITAILCRAKG 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01394 988 Pfam TIR domain 2 72 IPR000157 GO:0007165
Bva08g01394 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73 906 IPR044974 GO:0006952
Bva08g01394 988 SUPERFAMILY L domain-like 110 509 - -
Bva08g01394 988 PANTHER TMV RESISTANCE PROTEIN N-LIKE 73 906 - -
Bva08g01394 988 PANTHER TMV RESISTANCE PROTEIN N-LIKE 8 72 - -
Bva08g01394 988 Gene3D Ribonuclease Inhibitor 166 294 IPR032675 -
Bva08g01394 988 Gene3D Ribonuclease Inhibitor 295 458 IPR032675 -
Bva08g01394 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 72 IPR044974 GO:0006952
Bva08g01394 988 SMART LRR_typ_2 669 691 IPR003591 -
Bva08g01394 988 SMART LRR_typ_2 351 374 IPR003591 -
Bva08g01394 988 SMART LRR_typ_2 492 515 IPR003591 -
Bva08g01394 988 SMART LRR_typ_2 303 327 IPR003591 -
Bva08g01394 988 SMART LRR_typ_2 398 421 IPR003591 -
Bva08g01394 988 SMART LRR_typ_2 539 562 IPR003591 -
Bva08g01394 988 SMART LRR_typ_2 445 468 IPR003591 -
Bva08g01394 988 Gene3D Ribonuclease Inhibitor 459 617 IPR032675 -
Bva08g01394 988 Gene3D Ribonuclease Inhibitor 618 819 IPR032675 -
Bva08g01394 988 Gene3D - 1 76 IPR035897 -
Bva08g01394 988 SUPERFAMILY L domain-like 482 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01394 Bva-Chr8 7295977 7301183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01394 73 474 WRKY Transcription Factor Family AT4G12020 34.442 4.66e-44 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01394 - - lang:109340539 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01394 08 7295977 7301183 Bva08g01394 08 7295977 7301183 ECH