Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01375 ATGTGGTCGGAGAAAGCTGACAGCTTCGACCTCTCGCCGCCGGAATCCGACGAGGTTCATGTATTGGCCGTGGATGACAGTCTAGTTGATCGCAAAGTCATTGAGCGGTTGCTCAAAATTTCAGCTTGCAATTGTAAAGTCACTGCTGTGGATAGTGGAATGAGAGCCCTGCAATTTCTGGGACTGGACGCTGAGAAGAGCCCCTCCGATAGCTTTGATCATGGTTTAAAGGTGGATCTAATAATCACAGACTACTGTATGCCTGGAATGACCGGTTATGAACTGCTCAAGAAAATCAAgGAATCGTCTACCTTGAAGCAGATTCCCGTGGTGATTATGTCATCTGAGAACGTGTTGGCGCGTATTGAcagaTGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGACGTGAAACGGTTGAAGGATTATTACATGACGAGGTCAGAGGTTAGGGCGGGAAGCTGTCAAGACAAAGCAGGTGGGAGgatcaacaaaagaaagctaCCAGACACAGACACAGACACCATCACCCCCGATGATCTGTCTCCATCACCGCCGTCCATTTCTTCATCGACTCCCCCATCATCACCGTCGAATTCGCCTTCTTCTCCATCGTCGGTACCTTCATCTCCACCGGCGGTGCTTGATTCTCCAATTCGACGACTCAAAATGACCAGCACCGATTG 704 0.4773 MWSEKADSFDLSPPESDEVHVLAVDDSLVDRKVIERLLKISACNCKVTAVDSGMRALQFLGLDAEKSPSDSFDHGLKVDLIITDYCMPGMTGYELLKKIKESSTLKQIPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLSDVKRLKDYYMTRSEVRAGSCQDKAGGRINKRKLPDTDTDTITPDDLSPSPPSISSSTPPSSPSNSPSSPSSVPSSPPAVLDSPIRRLKMTSTD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01375 234 MobiDBLite consensus disorder prediction 161 234 - -
Bva08g01375 234 MobiDBLite consensus disorder prediction 193 214 - -
Bva08g01375 234 SMART REC_2 19 150 IPR001789 GO:0000160
Bva08g01375 234 Pfam Response regulator receiver domain 21 143 IPR001789 GO:0000160
Bva08g01375 234 ProSiteProfiles Response regulatory domain profile. 20 151 IPR001789 GO:0000160
Bva08g01375 234 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 233 IPR045279 GO:0009736
Bva08g01375 234 SUPERFAMILY CheY-like 19 154 IPR011006 -
Bva08g01375 234 MobiDBLite consensus disorder prediction 166 180 - -
Bva08g01375 234 CDD REC_typeA_ARR 21 146 - -
Bva08g01375 234 Gene3D - 19 179 - -
Bva08g01375 234 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 3 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01375 Bva-Chr8 7202049 7203628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01375 12 226 Response Regulator Gene Family AT1G59940 59.259 8.56e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva08g01375 Response_reg 3.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01375 K14492 - mnt:21410451 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01375 08 7202049 7203628 Bva08g01375 08 7202049 7203628 ECH