Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01367 AtgccatttggtttggtcTCAGCCTGGAACAAGCGCCGTAGAAGCAAGTCTCAAGATCACACAGACCCTTGGGTTTATAGACCTGCTGAGTTCTGGAAACTTGAAGATCAAGCACCAAAACCCGCAAAAAGGAGACATGGGTCAGCTGTTTTCACACTCAAGGAAATGGAAGAGGCAACATGTTCATTCAGTGATGATAATATGCTTGGGAAAGGAGGATTTGGCAGGGTCTACCGCGGCACTTTTCGTTCTGGAGAGGTTGTAGCAATCAAGAAAATGGAGCTGCCAGCATTCAAAGAAGCTGAGGGGGAGCGTGAGTTTCGTGTTGAAGTTGATATCTTGAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTATTGCGCTGATGGAAAGCACAGATTCTTAGTATACGAGTACATGCAAAATGGGAACCTGCAAGATCATTTGAATGGAATTGGGGAGAGAAAAATGGATTGGCCTCGAAGACTGAGAGTGGCACTTGGAGCAGCAAAAGGGCTTGCTTATCTTCATTCAGCTTCTGCCGTAGGAATTCCGATTGTTCATAGGGACTTCAAATCTACCAATGTTCTCTTAGgtgccaactttgaagcaaagATATCTGATTTTGGGCTTGCAAAGTTAATGCCAGAAGGCCAGGAGACACACGTCACTACCAAAGTACTCGGAACCTTCGGCTATTTTGACCCTGAGTACACATCGACTGGGAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTAGAACTTTTGACAGGACGTCGAGCTGTAGATCTAAACCAGGGTCCAAATGATCAAAACCTTGTATTGCAGGTGAGACACATACTGAATGACCGCAAGAAGCTCCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACCATCGAGTCTATTGCCATGTTTGCCAATCTGGCATCACGGTGTGTCCGTGTTGACGGTAGCGAGAGGCCCTCGATGCCAGAATGTGTAAAAGAACTTCAAATGATAATCTATACAAATTCAAGAGGCTTGGGAATGCTAATGCACAGTTTGAGAATGATCTA 1085 0.4313 MPFGLVSAWNKRRRSKSQDHTDPWVYRPAEFWKLEDQAPKPAKRRHGSAVFTLKEMEEATCSFSDDNMLGKGGFGRVYRGTFRSGEVVAIKKMELPAFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMQNGNLQDHLNGIGERKMDWPRRLRVALGAAKGLAYLHSASAVGIPIVHRDFKSTNVLLGANFEAKISDFGLAKLMPEGQETHVTTKVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMARNSYTIESIAMFANLASRCVRVDGSERPSMPECVKELQMIIYTNSRGLGMLMHSLRMI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01367 361 SUPERFAMILY Protein kinase-like (PK-like) 50 347 IPR011009 -
Bva08g01367 361 CDD STKc_IRAK 69 341 - -
Bva08g01367 361 Gene3D Transferase(Phosphotransferase) domain 1 142 351 - -
Bva08g01367 361 Gene3D Phosphorylase Kinase; domain 1 32 141 - -
Bva08g01367 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Bva08g01367 361 PIRSF ILK 32 351 - -
Bva08g01367 361 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 361 - -
Bva08g01367 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01367 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01367 361 PANTHER OS01G0750732 PROTEIN 1 361 - -
Bva08g01367 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01367 Bva-Chr8 7173943 7177298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01367 46 344 Receptor kinase-like Gene Family AT3G58690 46.053 1.08e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Bva08g01367 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01367 - - gmx:100796654 660.988