Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01359 atgctTACCAATTCCCACCCAGATTTACAGCCCAAAGAGAAAACcgcgaaaaagaaaaaaaaaaaaaaaaaaaaagaacaaaaaactCACGCAAGCACCGCATATTTATATCCGAACACACAGATAGAGGGCATTCAAACCAATTCTAATATCTTCACCAAGCACACTGCACACACACTCTCCCTGCAAAGCATTCCGGCGAATTCTCCGATCAGAGTTCTGGCAACCGTTCACCAGAAAACATGTCGAGAGAATGAGGAAAGTAAATCGGCGGAGATTGTCATGTCGGTTTCCTGCTCCGAATTCTTCCCCGACTCTGACCTCCTCTGCGCTGAGGACACCACCGATATTTTGTCCGGAGAGTCGCCAGATTGCTCGTCGGACCACGATTCTTCTTCGCCGTCAACGGAGGAATCGATAGCAGAATTCATCGAAGACGAGCGGAACTACGTCCCCGGATTCGACTACTTGTCCAGGTTCCAATCTCACTCACTCGACGCCTCCGCCAGACAAGAATCCGTTGCATGGATTCTCAAGGTCCACACATACTATGGTTTTCAGCCGCTGACGGCGTATCTCTCCGTCAACTACTTGGATCGGTTTTTGGATTTGCGGCGGTTGCCGCAAACAAACGGGTGGCCACTGCAACTATTATCTGTCGCTTGTTTGTCTTTAGCTGCAAAAATGGAGGAACCTCTAGTTCCATCTCTTTTGGATCTTCAGGTAGAAGGTGCCAAATATATCTTTGAGCCAAGAACAATTCGTAGGATGGAATTTCTTGTTCTTGGTGTCTTAGATTGGAGACTAAGATCAGTGACGCCTTTCAGCTTCCTCGGTTTCTTTGCCTGCAAACTCGACTCAACTGGAACTTTTTCAGGGTTCTTAATTTCACGGGCTACAGAAATCATCTTATCTAATATCCAAGAGGCAAGCTTTCTTGCATACTGGCCATCATGCATTGCTGCCGCAGCCATACTTTGTGCAGCTAATGAAATTCCTAATTGGTCTATCGTTAAACCCGAGCATGCTGAGTCATGGTGCGAGGGACTAAGAAAAGATAAAATCATAGGCTGCTATCAGTTAATGCAAGAGCTTGTGATTGACAATAACAGGAAGAAGGCCCCTAAAGTCTTACCGCAGCTTCGAGTAACAACACTGCCCAGAATTAGAATGAGGTCAAGTATCTCATCGTTCTCATCATCACCGccttcctcctcttcttcatcctcATCCTCCTTCTCATGGTCTTCTAAAAGgaggaaattaaataactGCTTGTGGGTAGATGATGACAAAGGAAGCTG 1304 0.4356 MLTNSHPDLQPKEKTAKKKKKKKKKEQKTHASTAYLYPNTQIEGIQTNSNIFTKHTAHTLSLQSIPANSPIRVLATVHQKTCRENEESKSAEIVMSVSCSEFFPDSDLLCAEDTTDILSGESPDCSSDHDSSSPSTEESIAEFIEDERNYVPGFDYLSRFQSHSLDASARQESVAWILKVHTYYGFQPLTAYLSVNYLDRFLDLRRLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMEFLVLGVLDWRLRSVTPFSFLGFFACKLDSTGTFSGFLISRATEIILSNIQEASFLAYWPSCIAAAAILCAANEIPNWSIVKPEHAESWCEGLRKDKIIGCYQLMQELVIDNNRKKAPKVLPQLRVTTLPRIRMRSSISSFSSSPPSSSSSSSSSFSWSSKRRKLNNCLWVDDDKGS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01359 434 ProSitePatterns Cyclins signature. 170 201 IPR006671 -
Bva08g01359 434 SMART Cyclin_C_2 272 412 IPR004367 -
Bva08g01359 434 SUPERFAMILY Cyclin-like 129 269 IPR036915 -
Bva08g01359 434 Pfam Cyclin, N-terminal domain 140 269 IPR006671 -
Bva08g01359 434 Gene3D - 153 270 - -
Bva08g01359 434 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 95 411 - -
Bva08g01359 434 SUPERFAMILY Cyclin-like 254 370 IPR036915 -
Bva08g01359 434 Gene3D - 143 336 - -
Bva08g01359 434 PIRSF Cyclin_A_B_D_E 2 384 IPR039361 -
Bva08g01359 434 PANTHER CYCLINS 95 411 IPR039361 -
Bva08g01359 434 CDD CYCLIN 170 262 IPR013763 -
Bva08g01359 434 SMART cyclin_7 175 263 IPR013763 -
Bva08g01359 434 Pfam Cyclin, C-terminal domain 272 377 IPR004367 -
Bva08g01359 434 MobiDBLite consensus disorder prediction 1 34 - -
Bva08g01359 434 MobiDBLite consensus disorder prediction 394 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01359 Bva-Chr8 7130402 7134010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01359 95 431 Core Cell Cycle Gene Families AT1G70210 62.647 3.30e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01359 K18810 - gmx:100775224 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01359 08 7130402 7134010 Bva08g01359 08 7130402 7134010 ECH