Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01327 ATGGATCCAAAAAGCTCAGGCATGAATGAGTCTTTCATAGTTCCTTTGCTAATGGCGGCGTCTACTCCTAAAACTTCGCCGCCGTCACTTGGTGATGATTCTAATACTACCCTTACATTTGATCTTCCACCGAAATCTTCGCCGTCACCGTTGCAGTCTTCACCACCTTCTCCCAGTCCTTCGCCGCCGCCAAAAGATTCACCATCGCCAAAAGCTTTACCATCACCATCGCCAAAAACTTTACCATCACCATCACCACCACCGTCTTCACCGCCGTATTCTCCACCGCCGCCACCAAAAGATTCATCATCACAACCTTCAAGTAACAAATCTCCTCCACCTCCATATAAACCAACTGCACCTCCCCCTTCTAATGGTTCATCCTCCTCGGGCGCCGGAACCTCTAAGAAATTACCGCCATCACGGTTACCATGGTACTCTTCTCTCGCTCCAAATAACACTTCCGCACCGAACAGATTTAGCTCCCCACCACCAACGGTGTTTAGTCCTCCTCCGATCTCTAAATCAAATCGTCCTCCACCGCCGCACTCATCCGCGGTTTCCGCTGGTTCCCACGGAAAATCAAATAACTCCACTTATAGCTCCTTAAATTCAAGCTCAGGAGGGGGTGATGACAACTCAGCAAATTACGTTGGTGCTGTAGTAGCTggagtttttattattattgcctTGGTTGTCGCAGTTGTCTTGTTGCTCATaaggaggagaagaaaacGAGTACAAGTCTATGCTGCACCACATTTTATGCCTCCGAACAGCCCTCCTATGACACCAGATTGGCATTACTACGTACAGCGTCAGCATGGTACTGGGAATGCTTCAAAAGATGGTATCTATAGAAATGGCTCTCAAAACCTATTAGGTAATCCTGATACAGGACCCATATCTGCTCAAATAGTTTTCAGCTATGAGAAAATTATGGAGATAACTAATGGTTTTTCTCGGCAAAACATAATTGGTGAGGGTGGATTTGGATATGTGTACAAGGCTCAGCTTCCAGATGGTAGAATGGCTGCTGTAAAAAAGTTGAAAGCTGGCAGTGGCCAAGGGGAACGGGAGTTCAAGACTGAAGTTGAAATAATCAGTCGCTTACATCATAGACATCTTGTCTCCTTAGTTGGATATTGCATAGAAGAAGGTCaaagaattttgatatatGAATTCGTTCCTAATAAAACACTTGATCATCATTTGCATGGCAGAGATATGCCAGTTCTGGATTGGGCCAAAAGGCGAAAGATGGCTATAGGCGCAGCAAAGGTTTTGGCATATCTACATGAAGACTGCAgccaaaaaattattcataggGATATCAAGTCTGCAAACATCCTCTTGGATGATGCTTTTGAAGCCCAGGTTGCGGACTTTGGACTGGCCAAGTTCCGAATTCcagaatttttagaaaaagaaatgaaaattttccttaattG 1451 0.4259 MDPKSSGMNESFIVPLLMAASTPKTSPPSLGDDSNTTLTFDLPPKSSPSPLQSSPPSPSPSPPPKDSPSPKALPSPSPKTLPSPSPPPSSPPYSPPPPPKDSSSQPSSNKSPPPPYKPTAPPPSNGSSSSGAGTSKKLPPSRLPWYSSLAPNNTSAPNRFSSPPPTVFSPPPISKSNRPPPPHSSAVSAGSHGKSNNSTYSSLNSSSGGGDDNSANYVGAVVAGVFIIIALVVAVVLLLIRRRRKRVQVYAAPHFMPPNSPPMTPDWHYYVQRQHGTGNASKDGIYRNGSQNLLGNPDTGPISAQIVFSYEKIMEITNGFSRQNIIGEGGFGYVYKAQLPDGRMAAVKKLKAGSGQGEREFKTEVEIISRLHHRHLVSLVGYCIEEGQRILIYEFVPNKTLDHHLHGRDMPVLDWAKRRKMAIGAAKVLAYLHEDSKKLFIGISSLQTSSWMMLLKPRLRTLDWPSSEFQNF 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01327 472 PRINTS Proline rich extensin signature 58 79 - -
Bva08g01327 472 PRINTS Proline rich extensin signature 41 53 - -
Bva08g01327 472 PRINTS Proline rich extensin signature 20 36 - -
Bva08g01327 472 PRINTS Proline rich extensin signature 84 100 - -
Bva08g01327 472 MobiDBLite consensus disorder prediction 19 210 - -
Bva08g01327 472 Gene3D Transferase(Phosphotransferase) domain 1 397 443 - -
Bva08g01327 472 MobiDBLite consensus disorder prediction 180 210 - -
Bva08g01327 472 ProSitePatterns Protein kinases ATP-binding region signature. 326 349 IPR017441 GO:0005524
Bva08g01327 472 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 50 437 - -
Bva08g01327 472 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 50 437 - -
Bva08g01327 472 MobiDBLite consensus disorder prediction 163 179 - -
Bva08g01327 472 SUPERFAMILY Protein kinase-like (PK-like) 302 435 IPR011009 -
Bva08g01327 472 MobiDBLite consensus disorder prediction 22 47 - -
Bva08g01327 472 ProSiteProfiles Protein kinase domain profile. 320 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01327 472 Gene3D Phosphorylase Kinase; domain 1 298 395 - -
Bva08g01327 472 MobiDBLite consensus disorder prediction 48 122 - -
Bva08g01327 472 Pfam Protein tyrosine and serine/threonine kinase 323 435 IPR001245 GO:0004672|GO:0006468
Bva08g01327 472 MobiDBLite consensus disorder prediction 146 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01327 Bva-Chr8 6941577 6942422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01327 205 436 Trihelix Transcription Factor Family AT1G70460 47.860 1.15e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva08g01327 PK_Tyr_Ser-Thr 1.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01327 - - vvi:100853911 246.899