Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01322 atgacgAAAGCAGAGAACGAGTACAAGAAAGGGTTATGGACTGAGGAGGAAGACAAGATTTTGCTAGAATACGTCAGGGTGCATGGAAGAAGGCACTGGAACCGCATTTCCAAAGTAACATGCTTAGAGAGGAATGGGAAAAGCTGCAGATTAAGGTGGATGAACTATCTCTGCCCAAACGTCAAACATGGCGAGTTCTCAGAGGAAGAAGACGACCTCATCATTAGACTCCATAACCTCCTTGGAAACAGGTGGTCTCTCATAGCAGGGAGGGTGCCTGGAAGAACTGACAACCAAGTGAAGAACCATTGGAACACTCATTTGTGTAAGAGACTTGGTATCACAAAGCAAACTAGAAAACACAGGGTGCCCTCAAAATCAAATCGTTCAGATGTGAAAAGGACCGAAGCAGTGCCTTCGAGTTCAACCTGTGGAACCCTTTCTCCAAGTAGCTATCAAAAAGGGGCTGAAGTACAAGGGCAAGGAAGCTCTTTGAATGGTTTGGAGGCACAATGTGAAGGAGGGAAGCACAGTGACCcatctttgttattttatgacCAGAGTTTCGTTCTAGATAGTCCTCATTTAATGGAATTCTTTGATGGGTTTGACCTAATAATGta 623 0.4302 MTKAENEYKKGLWTEEEDKILLEYVRVHGRRHWNRISKVTCLERNGKSCRLRWMNYLCPNVKHGEFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKRLGITKQTRKHRVPSKSNRSDVKRTEAVPSSSTCGTLSPSSYQKGAEVQGQGSSLNGLEAQCEGGKHSDPSLLFYDQSFVLDSPHLMEFFDGFDLIM 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01322 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Bva08g01322 207 CDD SANT 65 108 IPR001005 -
Bva08g01322 207 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 203 - -
Bva08g01322 207 CDD SANT 13 57 IPR001005 -
Bva08g01322 207 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Bva08g01322 207 Pfam Myb-like DNA-binding domain 64 108 IPR001005 -
Bva08g01322 207 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Bva08g01322 207 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Bva08g01322 207 Gene3D - 64 138 - -
Bva08g01322 207 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Bva08g01322 207 MobiDBLite consensus disorder prediction 134 160 - -
Bva08g01322 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 112 IPR017930 -
Bva08g01322 207 Gene3D - 2 63 - -
Bva08g01322 207 MobiDBLite consensus disorder prediction 117 160 - -
Bva08g01322 207 SMART sant 62 110 IPR001005 -
Bva08g01322 207 SMART sant 9 59 IPR001005 -
Bva08g01322 207 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01322 Bva-Chr8 6918701 6920963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01322 5 205 MYB Transcription Factor Family AT5G40330 50.239 3.39e-60 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva08g01322 Myb_DNA-binding 7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01322 K09422 - cit:102614177 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01322 08 6918701 6920963 Bva08g01322 08 6918701 6920963 ECH