Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01310 ATGTCAGATTTCTCTGTTTATGGTATAATGAAGTTTAAACAACTAAACTGCTTGATATTATTTCCCTTAATCTTGATCAGCATCCTTGATCTTGTCCGCTGTCAAGCTTCTATAGATGAGTGTGTCCTTGATATTCAATCTCCTTCACCCTTGAATAGCTCAAACTGCAGATTACACACTTGGGGAGGCTTCATCAACAGTTGCTGTGGACTAAACTTTGATGATTATCTATATGCATTAGCCCTGCAAGCCAACCAAACCGGAAAGATATTCTTGAGTTCTTCAGAGCAGAAAGCCTGcttatcaaattttacagGCTGTGGAATTGAGAAGCTAACGATTGGAGCTGGTGCTTGTTCTGACTACACTGTCAACGATGTTATCAACAAGCTTGGAGACAACTTGAGAAAAATAGATGACGGTTGCATGTCTTTGAGTACAGAAAATGGGACTTGTGGTGCATGTTTAAGAAGGTGGGAGGAGATTACTGCAGCATCAGACTCAGCAGATACTGATGTTGGTACCAATCTTTGTGGATTTGCAGTATTGATCTCTCTCACAAGCTTCAGAATTTATGATAGGCAATCCATAGAGGCATTATATGAATGCCTTGGGACCCACAACCATCCTGCAGGTAAACAAGAAGCTAGCAGTGGCAATGCTAAGCTAAGCCCAGGTCCTTGGATTCTAGCATTTGGATCAGCTGGAATCACAGTAATAGTAGTGCTTCTTGCAGTATGGACCTTTTTCAGAAATAGAACTAGAAGTCATCGAAAAGAAACAGATGCACACAGTTCTGAGTTTGAGGATTCAACCTGTCCTAACTTCACAATCAAGGAAATTTATATAGCAACCAACAAGCTCAGCGCATCAAATTTCATCGGTGAAGGCATAGCTGGAAAAGTGTACAAGGGTATACTCTCCAATGGTCAGCATGTTGCAGTTAAGCACATAACTAATGAAGGGTACTTGGAGACATTTGCTAGAGAAGTGAGAAGCCTCTCTCATGTTAGACATCCAAACCTTGTGGCTTTGCTGGGATACTGTGAGAATGAAGATGAATGCTTCTTAGTTTATGAGCTATGCCACAAAGGGAACCTTTCACAGTGGCTATTTGGCAAAGATAACACTCTTTCTTGGATTCAAAGACTAGAGATTGCAGTGGATAGTGCAAGAGGTCAAGCATTTCTGCACAACTACTCAAGTGGCTGCATTGTTCACCGTGATATCAAGCCATCAAACATTCTAATTGATGCCAACTTCCAAGCAAAACTTTCAGACTTTGGTTTGTCTAGAGTTATGGAGTTGGGTCAATCCTATGTGAGCTCTGAAGTAAGAGGAACATTTGGTTATATAGATCCCGAATATAGGAAAAATCACCGTGTAAATGTCTCAGGAGATGTCTACAGTTTTGGGATAGTGCTACTGCAGCTTCTATCAGGACAAAGGGTCATGAATTTTGATCTCCAAAGACCTATGAccctaaataaaattGCCATAACTTTTGCAAGAGGAGAGAGATTGGAATTTGCAGACCCTAGACTCAAAGGGAGTTTTCAGTGGAAGCATTTGACATTACACTA 1583 0.403 MSDFSVYGIMKFKQLNCLILFPLILISILDLVRCQASIDECVLDIQSPSPLNSSNCRLHTWGGFINSCCGLNFDDYLYALALQANQTGKIFLSSSEQKACLSNFTGCGIEKLTIGAGACSDYTVNDVINKLGDNLRKIDDGCMSLSTENGTCGACLRRWEEITAASDSADTDVGTNLCGFAVLISLTSFRIYDRQSIEALYECLGTHNHPAGKQEASSGNAKLSPGPWILAFGSAGITVIVVLLAVWTFFRNRTRSHRKETDAHSSEFEDSTCPNFTIKEIYIATNKLSASNFIGEGIAGKVYKGILSNGQHVAVKHITNEGYLETFAREVRSLSHVRHPNLVALLGYCENEDECFLVYELCHKGNLSQWLFGKDNTLSWIQRLEIAVDSARGQAFLHNYSSGCIVHRDIKPSNILIDANFQAKLSDFGLSRVMELGQSYVSSEVRGTFGYIDPEYRKNHRVNVSGDVYSFGIVLLQLLSGQRVMNFDLQRPMTLNKIAITFARGERLEFADPRLKGSFQWKHLTLH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01310 527 Gene3D Phosphorylase Kinase; domain 1 249 361 - -
Bva08g01310 527 PANTHER - 34 521 - -
Bva08g01310 527 Gene3D Transferase(Phosphotransferase) domain 1 363 525 - -
Bva08g01310 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Bva08g01310 527 SMART serkin_6 288 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01310 527 ProSiteProfiles Protein kinase domain profile. 288 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01310 527 SUPERFAMILY Protein kinase-like (PK-like) 265 488 IPR011009 -
Bva08g01310 527 Pfam SPARK 39 168 IPR043891 -
Bva08g01310 527 Pfam Protein kinase domain 292 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01310 527 PANTHER OS01G0750732 PROTEIN 34 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01310 Bva-Chr8 6859007 6861697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01310 251 526 Receptor kinase-like Gene Family AT1G49100 40.070 3.19e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Bva08g01310 Pkinase 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01310 - - gsj:114395768 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01310 08 6859007 6861697 Bva08g01310 08 6859007 6861697 ECH