Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01302 ATGGTATCAAGATCATATGCTAACCTCTTAGACTTAGCAGCTGGAGACTTATTGGATATTCCTCAAACGCCTCGAACTCTTCCAAGGGTTATGACAGTCCCTGGAATTATTTCTGACATGGACGGTGGTGGTGGCAATGATGGGGACTCAGATGTTAGCTCTTCTGCATGTAGGGAGCGGAAAATTGTAGTGGCAAACATGCTCCCTTTGCAGGCAAAAAAGGATATAGAAACCGGTAAATGGTGCTTCAGTTTGGATGAggattcaattttattacaattaaagGATGGTTTTTCTTCTGATATTGAGGTTATCTATGTGGGGTCCCTTAAGGCTGAAATAGATGCCAGTGACCAGGAAGAAGTTGCTCAGAGATTACTGGAGGATTTTAATTGTGTGCCTACTTTTTTACCTCATGATCTCCAGAAAAAGTTCTATCTTGGCTTTTGTAAGCAGCAGCTATGGCCTCTCTTTCACTATATGCTACCCATGTGCCCAGATCATGGTGACCGCTTTGATCGCTTGCTTTGGCAGGCTTATGTTTctgcaaacaaaatatttgcaGACAAGGTTATGGAAATAATTAATCCTGATGATGATTTTGTTTGGGTTCATGATTATCACTTAATGGTTTTGCCTACTTTTTTGAGGAAGCGATATAATCGAGTTAAACTTGGATTCTTTCTTCACAGCCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCAGTACGAGATGAAATTCTAAGGGGATTGTTGAATTCTGACTTGATTGGTTTCCATACATTTGACTATGCTCGCCACTTTCTCTCTTGCTGCAGTAGAATGCTGGGTCTGGACTATGAGTCTAAACGGGGGCACATAGGACTTGATTACTTTGGCCGCACtgttttcatcaaaattttgcCTGTAGGCATTCACATGGGCAGGCTTGAATCTGTACTAAACCTTCCTTCTACGTCtagtaaaatgaaagaaattcaagaagaGTTTAAGGGTAGAAAGGTTATTCTTGGTGTTGATGATATGGACATATTTAAGGGCATCAGTCTGAAACTTCTAGCTGTGGAACAGTTGCTACGGCAAAATCAAGAATTGCAGGGTAAAGTTGTCTTAGTTCAAATTGTGAATCCTGCAAGGGGTTCAGGAAAGGATGTTCAGGAAGCAAAGAAGGAAACATATTTAATTGCCCGAAGGATCAACAATACTTATGGTTCACATCATTATCAGCCGGTTATTCTTATTGACCGTCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGCAGCAGAGTGTTGCATTGTCAATGCTGTAAGGGATGGTATGAACTTAGTCCCTTACAAGTATATTGTTTGCAGACAGGGAACTCCAAAACTGGATGAAGCATTGGGCAGAAAAAGTGAATCTTCTCGTACAAGTATGCTTGTTGTATCTGAGTTCGTTGGTTGTTCACCTTCTCTAAGTGGAGCAATCAGGGTTAATCCATGGGATGTAGATGCTGTTGCTGATGCTTTGAATTCGGCCCTTACAATGAGTGATTCAGAGAAGCAATTGCGGCATGAAAAGCATTACCGATATGTCAGCTCTCATGATGTGGCTTATTGGGCACGCAGCTTTATGCAGGATTTAGAGAGAGCATGTAAAGATCATTACACCAAAAGATGCTGGGGGATTGGTTTGGGCCTTGGTTTCAGAgttgtttctctttctcctgGTTTTAGGAAGTTGTCTATTGATCACATTGTTTCAGCGTACAAAAGAACCAATAGGAGAGCCATACTTCTTGACTACGATGGTACTGTTGTACCACAATCTTCTATTGTTGAAACCCCCAGTCCAGAAGTCATATCTGTGTTAAATACTCTGTGCAATGATCCCAAGAACACTGTGTTCATTGTTAGTGGGAGGGGAAGAGATTCTCTGGGCAATTGGTTTGATTCCTGCAAAATGCTGGGACTTGCTGCTGAACATGGGTATTTCTTAAGGTGGAGCAGAGACTCCGAATGGGAAGCCAGTCACTTGTCTGCTGACCTGGATTGGAAAAAGATAGTGGAACCTGTGATGAGGTTGTATACGGAGGCAACTGATGGGTCTAATATCGAGATTAAAGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCGGACTTCGGTTCTTGCCAAGCCAAGGAATTGTTGGATCACTTGGAGAGTGTGCTTGCCAATGAACCAGCAGTTGTTAGCAGGGGCCAACATATTGTTGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTGGTAGCTGAAAAGGTTCTTTTGACCATGGTCAATGATGGGAACCCACCTGATTTTGTAATGTGCATAGGAGACGATAGGTCTGACGAAGATATGTTTGAGAGTATATTACGTTCAGTTTCTTGTCCATCAATGCCAGTTACTCCGGAGATCTTTGCTTGCACTGTTGGACGGAAGCCTAGTAAGGCTAAATATTATCTTGACGATGCTGCTGATGTTGTAAAATTGCTTCAAGGCCTTGCTACAGCATCAAATCCAAAGCCTAGGCATCTAGCCCAATTTCAAGTTTCTTTTGAGAGCACAGTTTG 2585 0.4097 MVSRSYANLLDLAAGDLLDIPQTPRTLPRVMTVPGIISDMDGGGGNDGDSDVSSSACRERKIVVANMLPLQAKKDIETGKWCFSLDEDSILLQLKDGFSSDIEVIYVGSLKAEIDASDQEEVAQRLLEDFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRLLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLPSTSSKMKEIQEEFKGRKVILGVDDMDIFKGISLKLLAVEQLLRQNQELQGKVVLVQIVNPARGSGKDVQEAKKETYLIARRINNTYGSHHYQPVILIDRPVPRFEKSAYYAAAECCIVNAVRDGMNLVPYKYIVCRQGTPKLDEALGRKSESSRTSMLVVSEFVGCSPSLSGAIRVNPWDVDAVADALNSALTMSDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVVSLSPGFRKLSIDHIVSAYKRTNRRAILLDYDGTVVPQSSIVETPSPEVISVLNTLCNDPKNTVFIVSGRGRDSLGNWFDSCKMLGLAAEHGYFLRWSRDSEWEASHLSADLDWKKIVEPVMRLYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVSRGQHIVEVKPQGISKGLVAEKVLLTMVNDGNPPDFVMCIGDDRSDEDMFESILRSVSCPSMPVTPEIFACTVGRKPSKAKYYLDDAADVVKLLQGLATASNPKPRHLAQFQVSFESTV 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01302 861 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Bva08g01302 861 Gene3D - 721 852 IPR023214 -
Bva08g01302 861 Gene3D - 591 708 IPR023214 -
Bva08g01302 861 SUPERFAMILY HAD-like 592 840 IPR036412 -
Bva08g01302 861 Pfam Trehalose-phosphatase 595 828 IPR003337 GO:0003824|GO:0005992
Bva08g01302 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 852 IPR001830 GO:0003824|GO:0005992
Bva08g01302 861 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 794 IPR006379 -
Bva08g01302 861 CDD HAD_TPP 593 834 - -
Bva08g01302 861 Gene3D Glycogen Phosphorylase B; 53 313 - -
Bva08g01302 861 Gene3D Glycogen Phosphorylase B; 314 529 - -
Bva08g01302 861 TIGRFAM T6PP: trehalose-phosphatase 590 840 IPR003337 GO:0003824|GO:0005992
Bva08g01302 861 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Bva08g01302 861 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 852 - -
Bva08g01302 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01302 Bva-Chr8 6807655 6812848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01302 1 861 Trehalose Biosynthesis Gene Families AT1G23870 75.894 0.0 1405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01302 K16055 - gmx:100775779 1573.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01302 08 6807655 6812848 Bva08g01302 08 6807655 6812848 ECH