Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01293 ATGAAACAGCAACAGCTAGCACTGAACAAGAGCAGAAGCATAATGCAGGGTGTAGGAATTACAACACTAATGGTTGCTGTTCAGTGCTGTGACGTGGGCTTAAACACCATCTTCAAAGCAGCCACTAGCAAAGGGATGAGTAACTTTGTTTTCATTGTGTATTCAAACGCCTTggctttctgttttcttttaccaTCTACAATCATCTATCACAGAAAGAAAGCTGCTCCCCCAATCACCATCTCCTTATTAAGGAGAGTTTTTGTTCTAAGCTTGGTCAGCTATTCTGTGCAGACGTTGACGTATACTGGTATCAGATATAGCTCTCCCACTATAGCTTCAGTAATGGTGGATCTCACTCCTGCTTTTACCTTTATGCTTGCCATTATTTTCAGGTTTGAAAAGCTGGACTTGAAACTCCCAAGCAGCCAGGCAAAAGTTATTGGCACAGTGGTGTCCATTACCGGGGCACTGATTGTGACCTTATACAAGGGTATGCCCTTGACTAGTAGCTCTCAACCCGACACAGCAATATTATTGAGTGGGACTTTCCTCTCAAAAGGATCACACAGGCTTCTTGGATGCATTCTCCTTGCAGCTGCTAGTTTTTGTCTTTCGCTCTTGTTTAATGTTAAGACATGGATTATAAAAGACTATCCTGCAGAGATGATGGTGACAACCATTCTGCGCTCTTTTGTGGCTGTCCTATCTGCCATAGCAGCTCTCATTGCAGAGAGAAACCCAGAAGCATGGATCCTCAGACCAGATATGGAGTTGCTAGCCATATTCTATTCAGCAATTTTGGTGGTATCGTTTGGAAGCATTTTGCATTTATGGGCATGTCGCAAGAAAGGGCCTGTATATGTTGCTATGTTTACTCCTCTAGGGATGGTCATTGCTGTTGCCATGGGGGTTATATTATTGGGGGACATTCTTTATCTTGGAAGCATGATTGGAGCAGCCATAATATCAATTGGGTTTTATGCTGTGATATGGGGGCAAGCACAACAGGAAAAGATGCTTAATGACAAATATGAGACCTCCAACATTGTTTCATCAACTTCTTCTGCGGCACCTCTATTGAAGAACAATTGCATGCATGTGTG 1106 0.4213 MKQQQLALNKSRSIMQGVGITTLMVAVQCCDVGLNTIFKAATSKGMSNFVFIVYSNALAFCFLLPSTIIYHRKKAAPPITISLLRRVFVLSLVSYSVQTLTYTGIRYSSPTIASVMVDLTPAFTFMLAIIFRFEKLDLKLPSSQAKVIGTVVSITGALIVTLYKGMPLTSSSQPDTAILLSGTFLSKGSHRLLGCILLAAASFCLSLLFNVKTWIIKDYPAEMMVTTILRSFVAVLSAIAALIAERNPEAWILRPDMELLAIFYSAILVVSFGSILHLWACRKKGPVYVAMFTPLGMVIAVAMGVILLGDILYLGSMIGAAIISIGFYAVIWGQAQQEKMLNDKYETSNIVSSTSSAAPLLKNNCMHV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01293 368 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Bva08g01293 368 Pfam EamA-like transporter family 23 161 IPR000620 GO:0016020|GO:0016021
Bva08g01293 368 PANTHER WAT1-RELATED PROTEIN 19 353 - -
Bva08g01293 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 164 - -
Bva08g01293 368 PANTHER WAT1-RELATED PROTEIN 19 353 IPR030184 GO:0016021|GO:0022857
Bva08g01293 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01293 Bva-Chr8 6740976 6743091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01293 22 368 Nodulin-like Gene Family AT3G28050 44.413 1.05e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01293 - - gmx:100793168 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01293 08 6740976 6743091 Bva08g01293 08 6740976 6743091 ECH