Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01283 ATGTCTACACTGAACCATCTCTTTGATCTTCCAGAGCAGATATGCTATGTAAAATGTGGATTCTGTACCACCATATTAATGGTCAGTGTTCCATGCAGCAGTTTATCTCTGGTTGTAACAGTAAGATGTGGGCACTGCACTAGCCTACTTTCTGTTAATATGATGAAAGCTTCTTTTGTCCCTTTCCACCTCTTGGCTTCCCTCACTCATCTTGAGCCAAAAGAACGTAGTCCAGAAGAAGATATGAACAAGACTTTGGAAAACCAAAGTGCAACCATGGTAACTTATTCTGAttgtgaagaagaagatgtaACTCCCTTGGTTAACATCGTTAATAAACCCCCAGAGAAGAGGCAGCGAACACCTTCAGCTTATAACCGCTTCATCAAAGAAGAAATCAGAAGGCTCAAGGCTGAGAATCCTGACATGGCACACAAGGAAGCTTTCAGTACAGCTGCAAAAAATTGGGCCAATTTCCCCCCAAGTCACTGCAAAGAAGATGAGGAGAGCTGTAGCCAGACAGAACAACCTGTGGATCAGGTTTCTCATGTGAACCATCATGATGTTGATCAGGTTAATGAAGATGGCCAAGATTTTCGTGGAAGAAAGGTTCCAAGGAATTCCATTCTGGGAAGGACACCGTTTGAGTG 650 0.42 MSTLNHLFDLPEQICYVKCGFCTTILMVSVPCSSLSLVVTVRCGHCTSLLSVNMMKASFVPFHLLASLTHLEPKERSPEEDMNKTLENQSATMVTYSDCEEEDVTPLVNIVNKPPEKRQRTPSAYNRFIKEEIRRLKAENPDMAHKEAFSTAAKNWANFPPSHCKEDEESCSQTEQPVDQVSHVNHHDVDQVNEDGQDFRGRKVPRNSILGRTPFE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01283 216 SUPERFAMILY HMG-box 109 162 IPR036910 -
Bva08g01283 216 MobiDBLite consensus disorder prediction 190 216 - -
Bva08g01283 216 Pfam YABBY protein 11 164 IPR006780 GO:0007275
Bva08g01283 216 Gene3D High mobility group box domain 111 192 IPR036910 -
Bva08g01283 216 PANTHER PROTEIN YABBY 6-RELATED 1 179 IPR006780 GO:0007275
Bva08g01283 216 PANTHER AXIAL REGULATOR YABBY 4 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01283 Bva-Chr8 6713503 6715337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01283 2 216 C2C2-YABBY Transcription Factor Family AT1G23420 58.772 1.44e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva08g01283 YABBY 2.1e-63 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01283 K25796 - gmx:100806755 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01283 08 6713503 6715337 Bva11g01158 11 12620315 12622314 BWGD
Bva08g01283 08 6713503 6715337 Bva08g01283 08 6713503 6715337 ECH