Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01272 ATGAAGAACGTTGTCCCTCTTGTCCTCTGTCAATGttttattctcattctcatcGAGTTACTATCACACTCAGAAATGGTAGTGGGGGATGCAAGAGCCAAGACTGTTAAAATCATATGTGGCCATCAGCGGGAGCACAATACCACTATCTATGTTCCAAATTTTGTTGCAACCATGGAGGATATCAGTGATCAGATGCGCAATTCCGGCTATGGCACAGCAGTTACAGGGACAGGACCAGACACAAACTATGGTCTGGCTCAATGTTATGGAGATCTCTCGTTACTAGATTGTGTCCTATGTTATGCCGAGGCACGAACGGTTCTTCCCCAATGTTTCCCTTACAATGGCGGCCGCATTTACCTTGATGGCTGCTTCATGAGAGCTGAGAACTATAGCTTCTTCGGTGAGTATTTAGGAGCAGGAGACAGAGCAGTTTGTGGTAACAATACCAAGAAGAACTCAAATTTTCAAGCTGCAGCAAGGCAAGCAGTTTTGAGTTCGGTTCACAATGCACCTTCTAATAAAGGCTATGCAAGAGGAAAGATTGCTGTGTCAGGAACAGCAAATGAATCAGCTTATGTTCTAGCTGATTGTTGGAGGAGTCTCAACACAAGCTCCTGCAAAGCATGTCTGGAGAAAGCATCCTCGTCGATATTGAGATGCTTGCCATGGTCAGAAGGAAGAGCACTCTTTACTGGGTGTTTCATGAGGTACTCAGACAGAGATTTTCTTAACAAGGAACTGGAAGATAGAAGTTCTAGAGGTAATGTAGTTGTGATAGTGGTAGCAGTTGTTAGTTCAGTGATTGTTTTGGTGGTGGGAGTAACCGTTGGGGTTTATGTCTGGAAACAAAGATACATTCAAAAGAAACGAAGAGGTTCAAATGAAGCAAAAAAGTTGGCGAAGACCCTTCACCACAGCAGTTTGAACTTCAAGTACTCCACACTGGAGAAGGCTACAGGATCCTTTGATGACACTAACAAGCTTGGACAAGGAGGATTTGGAACAGTGTATAAGGGAGTTCTGCCTGATGGAAGAGAAATTGCTGTCaagagattatattttaacaacaGACATAGAGCAGCAGATTTCTGCAATGAAGTCAACATAATCAGTAGTGTTGAACACAAGAATCTCGTAAGACTGTTGGGCTGCAGTTTTTCCGGACCCGAAAGCCTACTTGTGTATGAGTTTCTGCCTAACAAGAGTCTTGATCGCTTCATTTTTGATAAAAACAAGGGCAAAGAACTCACTTGGGAGAAAAGATGCGAAATTATCATTGGAACAGCTGAAGGATTAGTCTACCTGCATGAGAACTCCAAGATTAGAATCATTCATAGAGATATAAAAGCTAGTAATATCTTATTAGATACAAGGCTTCGTGCAAAAATTGCAGATTTTGGTTTAGCCAGGTCCTTTCAAGAAGACAAGAGCCACATAAGCACAGCTATTGCGGGAACATTAGGGTACATGGCACCAGAGTACCTAGCCCATGGTCAATTAACTGAAAAAGCAGATGTGTATAGTTTTGGGATTGTATTGCTAGAAATAGTTACCGGAAGACAGAACAACAGGAGCAAAAGCTCAGAATATTCAGACAGCCTAGTCACAATGGCATGGAAACATTTCAAGTCGGGAACTACAGAACAACTTTATGATCCAAATCTGTCGTTGCAAGACAGCCACAATAGGAACATTAAGAATGAGGTTTTGAGAGTGTTACACGTAGGACTCCTATGCACACAAGAGGTCCCATCATTACGACCAACTATGTCAATGGCACTAAAGATGCTAACAAATATGGAGGAGCACCTTCCTTGTCCCTCTAACCCACCATTCATAGACGAAACCATGGAACTCCACGACACCTTTAATGACCCATTTTACCCTCTGAATGCGGCAACTTCCAGTTCAACTGCTACTATATCCTATAGTTCTTTTTATGCTAGGTG 1955 0.4184 MKNVVPLVLCQCFILILIELLSHSEMVVGDARAKTVKIICGHQREHNTTIYVPNFVATMEDISDQMRNSGYGTAVTGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNGGRIYLDGCFMRAENYSFFGEYLGAGDRAVCGNNTKKNSNFQAAARQAVLSSVHNAPSNKGYARGKIAVSGTANESAYVLADCWRSLNTSSCKACLEKASSSILRCLPWSEGRALFTGCFMRYSDRDFLNKELEDRSSRGNVVVIVVAVVSSVIVLVVGVTVGVYVWKQRYIQKKRRGSNEAKKLAKTLHHSSLNFKYSTLEKATGSFDDTNKLGQGGFGTVYKGVLPDGREIAVKRLYFNNRHRAADFCNEVNIISSVEHKNLVRLLGCSFSGPESLLVYEFLPNKSLDRFIFDKNKGKELTWEKRCEIIIGTAEGLVYLHENSKIRIIHRDIKASNILLDTRLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGIVLLEIVTGRQNNRSKSSEYSDSLVTMAWKHFKSGTTEQLYDPNLSLQDSHNRNIKNEVLRVLHVGLLCTQEVPSLRPTMSMALKMLTNMEEHLPCPSNPPFIDETMELHDTFNDPFYPLNAATSSSTATISYSSFYAR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01272 651 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Bva08g01272 651 Gene3D Transferase(Phosphotransferase) domain 1 400 608 - -
Bva08g01272 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 10 630 - -
Bva08g01272 651 SUPERFAMILY Protein kinase-like (PK-like) 308 635 IPR011009 -
Bva08g01272 651 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Bva08g01272 651 Pfam Protein kinase domain 325 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01272 651 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Bva08g01272 651 Pfam Salt stress response/antifungal 47 132 IPR002902 -
Bva08g01272 651 CDD STKc_IRAK 330 602 - -
Bva08g01272 651 SMART serkin_6 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01272 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 10 630 - -
Bva08g01272 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Bva08g01272 651 Gene3D - 32 134 IPR038408 -
Bva08g01272 651 Gene3D - 144 244 IPR038408 -
Bva08g01272 651 ProSiteProfiles Protein kinase domain profile. 324 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01272 651 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Bva08g01272 651 Gene3D Phosphorylase Kinase; domain 1 284 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01272 Bva-Chr8 6645794 6650008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01272 3 651 Receptor kinase-like Gene Family AT1G70520 67.025 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva08g01272 Pkinase 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01272 - - gmx:100804094 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01272 08 6645794 6650008 Bva08g01272 08 6645794 6650008 ECH