Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01271 ATGCTATCTCTCTCGCATTCCCTCACTTTCTCGCCCACCGACTCTGTTTTTGtccttgcattattttctCGCATTCCAAACACctatttctttcatcatccGTCAAACAACCGCCACCATTTTTTTCCTCCCTCAATGTTTCGTGCACCCTTTGTCCTCCTCTTCCTTGTTTGCCTTGTGTGTCCTGCTCTTTCCGACCCAAGAGCCACGGAGGCAGCCCTCGTGTGCACTAACAAAACTGCATCGATGTCTGAGCGTCAAACTTTCGTGGCGAATTTTTTAGCTGCTCTGGACACTATAAGCCCTCTAATTTCGAGGCAAAGATACGCAGCTGTTACTAATGGGACTGGCAATGCTGTTGTCTATGCTTTTGGTGAGTGCATGAAGGATCTTTCTAAATCAGATTGCGATGTCTGCTTTGCACAGTGCAAGACCCAGATTCTTAGATGCTTACCATTTCAAAAAGGAACTCGCGGTGGAAGGAACTTCTATGATGGGTGCTACCTCAGGTACGATGATCACAATTTCTTCAATCAAAGTCTCAGTGATCAAGATAAAACTGTTTGCTCAAAGAACGATTTTGGTGGGAATCAGACTATTTATAAAGCTAATACTTTAGAGTTAGTGAGGAATTTGAGTGTGGAAGCACCAAGGAATGACGGGTTTTTTGTGGGCTTTGTAAATCGAACGAATGTTACTGTTTATGGGTTGGCTCAGTGCTGGGAATTTGTTAATGGGAGTGCCTGCGAGCAGTGTTTGGCAGATGCTGTTACTGAGATTAGTTCATGTGTTCCAAAAGAAGAAGGGAGGGTGCTCAATGCTGGTTGTTATCTCAGGTATTCAACCCAAAAGTTCTACAACAATTCAACCACTAACCAGCCTGGAAGAAATCAAGGACGGCGTGTAGCTATAATAGCAGCTACATTGTCTGCTGCCTTGGCTTTTCTGCTTATTGTTGCAACAGTTGCTTTCTTTTCAAGGAAGAATGTgctgaagaagagaagagAAAGAAGGCAATTTGGTGCCCTTTTGGACACAGTGAACAAATCCAAGCTCAACATGCCATATGAAACTCTTGAAAGAgctacaaattattttaatgactCCAATAAGTTAGGACAGGGAGGATCAGGATCAGTCTATAAAGGAATTCTGCCAGATGGAACTACTGTCGCCGTTAAAAGGCTTTCTTTTAACACAGCACAATGGGTAGATCATTTCTTCAATGAGGTCAATTTGATCAGTGGTATTCATCACAAAAATCTTGTAAAACTTCTGGGTTGCAGCATTACAGGACCCGAGAGCCTTCTTGTTTATGAATATGTGCCAAACCAAAGCCTTCATGATCACTTTTCCGTTAAAAGGAATGCTCAGCCCTTGACATGGGAAGCCAGATCAAAAATCATCCTGGGAATAGCTGAGGGATTGTCCTATCTTCACGAGGAAGCTCAACTGAGAATAATTCAtagagatataaaattaagcaaCGTTTTGCTTGACGTAGACTTCACACCCAAGATTGCTGATTTTGGACTTGCTAGATTATTTCCTGAAAACAAGACTCACATTAGCACTGCCATTGCTGGCACGCTTGGCTACATGGCTCCAGAATATGTAGTTCGAGGGAAATTGACTGAGAAGGCAGATGTATATAGTTTTGGAGTtctaataattgaaattgtaaCTGGGAAGAGGAACAGTTCCTTTGTTCTGAACTCATCCTCTATCCTACAAATGGTTTGGAGCCTTTATAGATCAGATAAGCTATGTGACATCGTTGATCCAACACTAGAAGGCAATTATCAAGCTGAGGAAGCTTGTCGACTTCTAAAGATAGGGTTACTTTGTGCACAAGCTTCCGCAGAGCTGCGTCCATCAATGTCAGCGGTTGTAAAAATGATTACCAGCAATGACGAAATCCCTCAACCAACGCAGCCAccatttcttgtttcaacCAGTGAAGAATTCGGCACACCAACTACTCCATATAAATTGGAGCCTGGTTCCCACAGCCAGTCTTCAGGGAACAGCAACAGCATGACAGATAGCTTGCTTCAACCAAGATA 2066 0.408 MLSLSHSLTFSPTDSVFVLALFSRIPNTYFFHHPSNNRHHFFPPSMFRAPFVLLFLVCLVCPALSDPRATEAALVCTNKTASMSERQTFVANFLAALDTISPLISRQRYAAVTNGTGNAVVYAFGECMKDLSKSDCDVCFAQCKTQILRCLPFQKGTRGGRNFYDGCYLRYDDHNFFNQSLSDQDKTVCSKNDFGGNQTIYKANTLELVRNLSVEAPRNDGFFVGFVNRTNVTVYGLAQCWEFVNGSACEQCLADAVTEISSCVPKEEGRVLNAGCYLRYSTQKFYNNSTTNQPGRNQGRRVAIIAATLSAALAFLLIVATVAFFSRKNVLKKRRERRQFGALLDTVNKSKLNMPYETLERATNYFNDSNKLGQGGSGSVYKGILPDGTTVAVKRLSFNTAQWVDHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEYVPNQSLHDHFSVKRNAQPLTWEARSKIILGIAEGLSYLHEEAQLRIIHRDIKLSNVLLDVDFTPKIADFGLARLFPENKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLIIEIVTGKRNSSFVLNSSSILQMVWSLYRSDKLCDIVDPTLEGNYQAEEACRLLKIGLLCAQASAELRPSMSAVVKMITSNDEIPQPTQPPFLVSTSEEFGTPTTPYKLEPGSHSQSSGNSNSMTDSLLQPR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01271 688 CDD STKc_IRAK 372 635 - -
Bva08g01271 688 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 59 659 - -
Bva08g01271 688 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 59 659 - -
Bva08g01271 688 Gene3D - 70 176 IPR038408 -
Bva08g01271 688 Gene3D - 183 285 IPR038408 -
Bva08g01271 688 Gene3D Transferase(Phosphotransferase) domain 1 442 644 - -
Bva08g01271 688 Gene3D Phosphorylase Kinase; domain 1 325 441 - -
Bva08g01271 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Bva08g01271 688 ProSiteProfiles Gnk2-homologous domain profile. 71 176 IPR002902 -
Bva08g01271 688 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Bva08g01271 688 ProSiteProfiles Gnk2-homologous domain profile. 182 285 IPR002902 -
Bva08g01271 688 ProSiteProfiles Protein kinase domain profile. 366 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01271 688 Pfam Salt stress response/antifungal 189 282 IPR002902 -
Bva08g01271 688 Pfam Salt stress response/antifungal 76 173 IPR002902 -
Bva08g01271 688 MobiDBLite consensus disorder prediction 641 688 - -
Bva08g01271 688 Pfam Protein kinase domain 367 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g01271 688 SUPERFAMILY Protein kinase-like (PK-like) 352 664 IPR011009 -
Bva08g01271 688 SMART serkin_6 366 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01271 Bva-Chr8 6641959 6645136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01271 62 531 Receptor kinase-like Gene Family AT1G70530 63.136 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva08g01271 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01271 - - fve:101304483 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01271 08 6641959 6645136 Bva08g01271 08 6641959 6645136 ECH