Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g01269 atggcAAGTATGGAAATCTCAGGTTCTGCCACTGAATCTCAGgaaccaaaattttctcttccgGTGGATTCTGAACACAAGGCCACTGAGTTTAGATTATTCTCAGCGGCTAAGCCCCACATGCGGGCATTTCATCTATCTTGGATCTCCTTCTTTTCATGCTTTGTGTCCAGTTTTGCAGCACCACCCCTCCTTCCCATCATTCGTGATAACCTCAACCTCACAGCCACTGACATTGGAAATGCTGGGGTTGCATCAGTTTCTGGTGCAGTTTTTGCTCGAATTGCAATGGGGACCGCTTGTGACTTAGTTGGACCCCGTCTTGCTTCTGCCTCTCTCATCCTCCTCACTGCACCAGTAGTCTATTTCACTTCCATTGCATCATCTGCCACCTCCTTCCTCCTAGTACGCTTTTTCACAGGCTTCTCCTTGGCTACCTTTGTCTCAACTCAATTCTGGATGAGCTCTATGTTTTCAGCTCCAGTGGTTGGTCAAGCCAATGGAGTTGCAGCTGGATGGGGCAATCTTGGAGGCGGAGCCACGCAACTCATTATGCCCCTCGTATTTGGCCTTATCCGTGATATTGGTGCTACCACATTCACGGCATGGCGAATTGCATTTTTCGTTCCTGCACTGTTTCAAATGTCAACTGCATTTGCCATATTACTATTTGGCCAGGATATGCCAGATGGGAATTTCCATGGCTTGAAGAAATCAGGTGAAAAGGTAAAAGACGATTTCTCACGATTGCTGTATAATGGGGTCACGAATTACAGAGGGTGGATTCTGGCATTGACTTATGGGTATTGCTTTGGGGTAGAGCTGACTGTGGACAACATAATAGCTGAATACTTCTATGATAGATTTGATCTAAAACTCCATACAGCAGGAATAATTGCTGCAAGTTTTGGATTAGCCAATATCGTTTCTCGACCTGCAGGGGGAATGATATCAGATGCAATGGCAAAGAGGTTTGGAATGAGAGGTAGGCTATGGGCCTTATGGCTGTGCCAAACCTTGGGAGGTGTCTTCTGTGTAATCCTTGGCTTGGTGGGATCTTTAAGTGCATCAATCGTTGTAATGATCATATTCTCAGTGTTTGTCCAAGGAGCATGTGGGCTGACATTTGGGGTGGTTCCTTTTGTCTCAAGAAGGTCATTGGGAGTCATATCTGGAATGACAGGAGGTGGAGGCAATGTGGGTGCTGTTTTGACCCaactaattttcttcaaaggatccaaatattcaaaagaaagaggaataaCCTTAATGGGTGTCATGATCATAATTTGCACCCTCCCAATATGTTTAATCTACTTTCCTCAATGGGGAGGGATGTTCTGTGGTCCGTCGTCCAAAAAGATTTACACAGAAGAAGACTATTACTTGTCTGAGTGGAACTCCAAGGAGCAGGAGAAGGGCTCACATCATGCAAGCCTCAAATTTGCTGATAACAGCAGAAGTGAAAGGGGCAGAAGAGGGAACCTTGCAACCGGGTCTTCTAAAGAAGCAACAGCACCAGATGTTTG 1529 0.4395 MASMEISGSATESQEPKFSLPVDSEHKATEFRLFSAAKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTAPVVYFTSIASSATSFLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGQANGVAAGWGNLGGGATQLIMPLVFGLIRDIGATTFTAWRIAFFVPALFQMSTAFAILLFGQDMPDGNFHGLKKSGEKVKDDFSRLLYNGVTNYRGWILALTYGYCFGVELTVDNIIAEYFYDRFDLKLHTAGIIAASFGLANIVSRPAGGMISDAMAKRFGMRGRLWALWLCQTLGGVFCVILGLVGSLSASIVVMIIFSVFVQGACGLTFGVVPFVSRRSLGVISGMTGGGGNVGAVLTQLIFFKGSKYSKERGITLMGVMIIICTLPICLIYFPQWGGMFCGPSSKKIYTEEDYYLSEWNSKEQEKGSHHASLKFADNSRSERGRRGNLATGSSKEATAPDV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g01269 509 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 4 494 IPR044772 GO:0015112
Bva08g01269 509 MobiDBLite consensus disorder prediction 471 491 - -
Bva08g01269 509 Gene3D MFS general substrate transporter like domains 36 232 IPR036259 -
Bva08g01269 509 Gene3D MFS general substrate transporter like domains 244 444 IPR036259 -
Bva08g01269 509 MobiDBLite consensus disorder prediction 471 509 - -
Bva08g01269 509 MobiDBLite consensus disorder prediction 1 22 - -
Bva08g01269 509 CDD MFS_NRT2_like 44 437 IPR044772 GO:0015112
Bva08g01269 509 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 4 494 - -
Bva08g01269 509 Pfam Major Facilitator Superfamily 48 404 IPR011701 GO:0022857|GO:0055085
Bva08g01269 509 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 443 IPR020846 GO:0022857
Bva08g01269 509 SUPERFAMILY MFS general substrate transporter 35 440 IPR036259 -
Bva08g01269 509 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g01269 Bva-Chr8 6631581 6634502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g01269 4 492 Inorganic Solute Cotransporters AT1G12940 73.737 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g01269 K02575 - gmx:100787888 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01269 08 6631581 6634502 Bva08g01269 08 6631581 6634502 ECH